Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TOP2AP11388 RNU6-316P-201ENST00000391027 107 ntBASIC5.66□□□□□ -1.5
TOP2AP11388 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP2AP11388 RNA5SP356-201ENST00000515972 94 ntBASIC5.66□□□□□ -1.5
TOP2AP11388 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP2AP11388 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.66□□□□□ -1.5
TOP2AP11388 OR1AB1P-201ENST00000585564 761 ntBASIC5.66□□□□□ -1.5
TOP2AP11388 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.66□□□□□ -1.5
TOP2AP11388 AC017007.4-201ENST00000503353 1352 ntBASIC5.66□□□□□ -1.5
TOP2AP11388 AL356489.2-201ENST00000566968 3528 ntBASIC5.66□□□□□ -1.5
TOP2AP11388 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.65□□□□□ -1.5
TOP2AP11388 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.65□□□□□ -1.5
TOP2AP11388 RPL23AP71-201ENST00000470966 469 ntBASIC5.65□□□□□ -1.5
TOP2AP11388 NPM1P29-201ENST00000483112 803 ntBASIC5.65□□□□□ -1.5
TOP2AP11388 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.65□□□□□ -1.5
TOP2AP11388 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.65□□□□□ -1.5
TOP2AP11388 AC107934.2-201ENST00000518653 310 ntBASIC5.65□□□□□ -1.5
TOP2AP11388 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.65□□□□□ -1.5
TOP2AP11388 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.65□□□□□ -1.5
TOP2AP11388 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TOP2AP11388 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TOP2AP11388 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TOP2AP11388 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP2AP11388 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TOP2AP11388 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.64□□□□□ -1.51
TOP2AP11388 RPL5P18-201ENST00000406671 891 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 RPL35AP12-201ENST00000425362 338 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.64□□□□□ -1.51
TOP2AP11388 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TOP2AP11388 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
TOP2AP11388 AP000859.1-201ENST00000525536 307 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 HMGN2P47-201ENST00000559378 272 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TOP2AP11388 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.64□□□□□ -1.51
TOP2AP11388 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC5.64□□□□□ -1.51
TOP2AP11388 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TOP2AP11388 UBE2V1P2-201ENST00000397758 440 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 AL513175.1-201ENST00000431492 780 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 AC000041.1-201ENST00000439655 175 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP2AP11388 AC087312.1-201ENST00000471411 480 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.64□□□□□ -1.51
TOP2AP11388 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP2AP11388 HIGD1AP3-201ENST00000515857 278 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.64□□□□□ -1.51
TOP2AP11388 AC022080.3-201ENST00000544433 482 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP2AP11388 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.64□□□□□ -1.51
TOP2AP11388 AC103858.2-201ENST00000621471 543 ntBASIC5.64□□□□□ -1.51
TOP2AP11388 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.63□□□□□ -1.51
TOP2AP11388 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP2AP11388 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP2AP11388 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP2AP11388 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.63□□□□□ -1.51
TOP2AP11388 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
TOP2AP11388 CEP170P1-201ENST00000502249 4587 ntBASIC5.63□□□□□ -1.51
TOP2AP11388 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP2AP11388 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
TOP2AP11388 MIR448-201ENST00000362131 111 ntBASIC5.63□□□□□ -1.51
TOP2AP11388 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.63□□□□□ -1.51
TOP2AP11388 FTLP19-201ENST00000433300 394 ntBASIC5.63□□□□□ -1.51
TOP2AP11388 RPL23AP67-201ENST00000465341 474 ntBASIC5.63□□□□□ -1.51
TOP2AP11388 RPL5P16-201ENST00000471467 790 ntBASIC5.63□□□□□ -1.51
TOP2AP11388 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.63□□□□□ -1.51
TOP2AP11388 AC015917.1-201ENST00000579654 510 ntBASIC5.63□□□□□ -1.51
TOP2AP11388 MIR4727-201ENST00000622232 55 ntBASIC5.63□□□□□ -1.51
TOP2AP11388 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TOP2AP11388 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TOP2AP11388 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.62□□□□□ -1.51
TOP2AP11388 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOP2AP11388 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.62□□□□□ -1.51
TOP2AP11388 AC087190.4-201ENST00000574616 8334 ntBASIC5.62□□□□□ -1.51
TOP2AP11388 AL136116.1-201ENST00000403591 381 ntBASIC5.62□□□□□ -1.51
TOP2AP11388 VN1R51P-201ENST00000411675 945 ntBASIC5.62□□□□□ -1.51
TOP2AP11388 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.62□□□□□ -1.51
TOP2AP11388 AC004552.1-201ENST00000419089 348 ntBASIC5.62□□□□□ -1.51
TOP2AP11388 AC140076.1-201ENST00000449897 361 ntBASIC5.62□□□□□ -1.51
TOP2AP11388 ELOCP23-201ENST00000452014 332 ntBASIC5.62□□□□□ -1.51
TOP2AP11388 AC068724.1-201ENST00000487100 792 ntBASIC5.62□□□□□ -1.51
TOP2AP11388 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.62□□□□□ -1.51
TOP2AP11388 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.62□□□□□ -1.51
TOP2AP11388 IGHV3-29-201ENST00000604817 344 ntBASIC5.62□□□□□ -1.51
TOP2AP11388 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOP2AP11388 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TOP2AP11388 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TOP2AP11388 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP2AP11388 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP2AP11388 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.61□□□□□ -1.51
TOP2AP11388 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.61□□□□□ -1.51
TOP2AP11388 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.61□□□□□ -1.51
TOP2AP11388 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.61□□□□□ -1.51
TOP2AP11388 MTND2P25-201ENST00000449028 610 ntBASIC5.61□□□□□ -1.51
TOP2AP11388 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.61□□□□□ -1.51
TOP2AP11388 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.61□□□□□ -1.51
TOP2AP11388 MIR3162-201ENST00000581818 82 ntBASIC5.61□□□□□ -1.51
TOP2AP11388 PCA3_2.1-201ENST00000612507 409 ntBASIC5.61□□□□□ -1.51
TOP2AP11388 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.61□□□□□ -1.51
TOP2AP11388 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.61□□□□□ -1.51
TOP2AP11388 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TOP2AP11388 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms