Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC090616.2-202ENST00000584248 222 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AL160290.3-201ENST00000604869 165 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AC010201.1-201ENST00000605051 540 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 AP000238.1-201ENST00000608759 426 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC068792.1-201ENST00000621354 417 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 Z69908.1-201ENST00000622603 247 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.55□□□□□ -1.52
SNRPA1P09661 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.55□□□□□ -1.52
SNRPA1P09661 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNRPA1P09661 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.55□□□□□ -1.52
SNRPA1P09661 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNRPA1P09661 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNRPA1P09661 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNRPA1P09661 MTND4P4-201ENST00000439033 1366 ntBASIC5.55□□□□□ -1.52
SNRPA1P09661 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.54□□□□□ -1.52
SNRPA1P09661 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNRPA1P09661 AL133243.3-201ENST00000617415 3004 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.54□□□□□ -1.52
SNRPA1P09661 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.54□□□□□ -1.52
SNRPA1P09661 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNRPA1P09661 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNRPA1P09661 SPRR2C-201ENST00000290702 219 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 RNU6-553P-201ENST00000364047 96 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 RNU4-7P-201ENST00000364758 141 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 RNU6-532P-201ENST00000384318 107 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.54□□□□□ -1.52
SNRPA1P09661 AL356095.1-201ENST00000417217 199 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 RPL36AP10-201ENST00000421785 322 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.54□□□□□ -1.52
SNRPA1P09661 DLGAP5P1-201ENST00000430307 464 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 HMGB1P45-201ENST00000435986 653 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.54□□□□□ -1.52
SNRPA1P09661 ARL5AP2-201ENST00000444698 533 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 MTND2P19-201ENST00000449129 1012 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 MTND1P27-201ENST00000451117 902 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AL109741.2-201ENST00000455561 343 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNRPA1P09661 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.54□□□□□ -1.52
SNRPA1P09661 AC134698.5-201ENST00000519444 336 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 OR8R1P-201ENST00000543943 764 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.54□□□□□ -1.52
SNRPA1P09661 HIGD1AP17-201ENST00000554576 276 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.54□□□□□ -1.52
SNRPA1P09661 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.54□□□□□ -1.52
SNRPA1P09661 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.54□□□□□ -1.52
SNRPA1P09661 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC093227.2-201ENST00000589357 285 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AL139418.1-201ENST00000613613 177 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC122133.1-201ENST00000613964 233 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 SNX18P1Y-201ENST00000616231 511 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC090246.1-201ENST00000616499 426 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC234782.5-201ENST00000617723 324 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC007546.1-201ENST00000619452 559 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC007546.2-201ENST00000623996 360 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.54□□□□□ -1.52
SNRPA1P09661 AC119674.1-212ENST00000641155 993 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNRPA1P09661 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNRPA1P09661 SGO1P1-201ENST00000603525 1447 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.54□□□□□ -1.52
SNRPA1P09661 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SNRPA1P09661 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SNRPA1P09661 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNRPA1P09661 AP000526.1-201ENST00000603308 1388 ntBASIC5.54□□□□□ -1.52
SNRPA1P09661 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SNRPA1P09661 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNRPA1P09661 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
SNRPA1P09661 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNRPA1P09661 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.53□□□□□ -1.52
SNRPA1P09661 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNRPA1P09661 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNRPA1P09661 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SNRPA1P09661 RN7SKP280-201ENST00000364196 304 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.53□□□□□ -1.52
SNRPA1P09661 PPIAP31-201ENST00000405422 495 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 RNU6-757P-201ENST00000410334 100 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.53□□□□□ -1.52
SNRPA1P09661 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.53□□□□□ -1.52
SNRPA1P09661 RPEP2-201ENST00000432149 701 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AL354941.1-201ENST00000438600 464 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AC122718.1-201ENST00000439448 744 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.53□□□□□ -1.52
SNRPA1P09661 AC002542.1-201ENST00000440683 193 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 ELOCP30-201ENST00000447108 299 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 AC009961.3-201ENST00000449832 765 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 RPL23AP81-201ENST00000455252 467 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 FAM133DP-201ENST00000464802 691 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.53□□□□□ -1.52
SNRPA1P09661 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.53□□□□□ -1.52
SNRPA1P09661 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.53□□□□□ -1.52
SNRPA1P09661 AC099522.1-202ENST00000514718 367 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.53□□□□□ -1.52
SNRPA1P09661 AC023632.1-201ENST00000518463 375 ntBASIC5.53□□□□□ -1.52
SNRPA1P09661 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNRPA1P09661 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.53□□□□□ -1.52
SNRPA1P09661 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms