Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL513477.1-202ENST00000417061 214 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.1□□□□□ -1.91
SPTA1P02549 AC091862.1-201ENST00000438016 1100 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 RPS29P31-201ENST00000446147 164 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 snoU13.23-201ENST00000458863 104 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 AC023598.1-201ENST00000472521 361 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 AC025181.1-201ENST00000477507 416 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 RPL7P47-201ENST00000497299 556 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 HMGB3P13-201ENST00000511263 607 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 AC091826.1-201ENST00000514065 313 ntBASIC3.1□□□□□ -1.91
SPTA1P02549 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.1□□□□□ -1.91
SPTA1P02549 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.1□□□□□ -1.91
SPTA1P02549 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.1□□□□□ -1.91
SPTA1P02549 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.1□□□□□ -1.91
SPTA1P02549 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SPTA1P02549 SAGE2P-201ENST00000420011 2126 ntBASIC3.09□□□□□ -1.91
SPTA1P02549 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.09□□□□□ -1.91
SPTA1P02549 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.09□□□□□ -1.91
SPTA1P02549 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SPTA1P02549 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.09□□□□□ -1.91
SPTA1P02549 OR5J1P-201ENST00000313544 939 ntBASIC3.09□□□□□ -1.91
SPTA1P02549 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SPTA1P02549 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.09□□□□□ -1.91
SPTA1P02549 HMGN1P24-201ENST00000412282 298 ntBASIC3.09□□□□□ -1.91
SPTA1P02549 SMC4P1-201ENST00000414479 527 ntBASIC3.09□□□□□ -1.91
SPTA1P02549 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.09□□□□□ -1.91
SPTA1P02549 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.09□□□□□ -1.91
SPTA1P02549 AC022080.3-201ENST00000544433 482 ntBASIC3.09□□□□□ -1.91
SPTA1P02549 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.09□□□□□ -1.91
SPTA1P02549 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.09□□□□□ -1.91
SPTA1P02549 AC006539.2-201ENST00000601729 572 ntBASIC3.09□□□□□ -1.91
SPTA1P02549 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.09□□□□□ -1.91
SPTA1P02549 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SPTA1P02549 AC003985.2-201ENST00000562268 1669 ntBASIC3.09□□□□□ -1.91
SPTA1P02549 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SPTA1P02549 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SPTA1P02549 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
SPTA1P02549 AL450338.1-201ENST00000407987 512 ntBASIC3.09□□□□□ -1.92
SPTA1P02549 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.09□□□□□ -1.92
SPTA1P02549 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.92
SPTA1P02549 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.09□□□□□ -1.92
SPTA1P02549 AL109933.2-201ENST00000452651 260 ntBASIC3.09□□□□□ -1.92
SPTA1P02549 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.09□□□□□ -1.92
SPTA1P02549 AC021146.3-201ENST00000511911 260 ntBASIC3.09□□□□□ -1.92
SPTA1P02549 AC027281.1-201ENST00000574178 758 ntBASIC3.09□□□□□ -1.92
SPTA1P02549 CR383658.2-201ENST00000547576 1525 ntBASIC3.09□□□□□ -1.92
SPTA1P02549 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SPTA1P02549 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SPTA1P02549 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.08□□□□□ -1.92
SPTA1P02549 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SPTA1P02549 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.08□□□□□ -1.92
SPTA1P02549 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.08□□□□□ -1.92
SPTA1P02549 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.08□□□□□ -1.92
SPTA1P02549 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.08□□□□□ -1.92
SPTA1P02549 AC133134.1-201ENST00000466800 359 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 RPS17P11-201ENST00000474297 293 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.08□□□□□ -1.92
SPTA1P02549 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 AP000255.1-201ENST00000610276 676 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.08□□□□□ -1.92
SPTA1P02549 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPTA1P02549 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.08□□□□□ -1.92
SPTA1P02549 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPTA1P02549 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.08□□□□□ -1.92
SPTA1P02549 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPTA1P02549 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPTA1P02549 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SPTA1P02549 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.08□□□□□ -1.92
SPTA1P02549 AL135938.1-201ENST00000443141 297 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 AC008565.1-201ENST00000509046 885 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 AC138938.1-201ENST00000515431 782 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.08□□□□□ -1.92
SPTA1P02549 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.08□□□□□ -1.92
SPTA1P02549 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.08□□□□□ -1.92
SPTA1P02549 AC092868.3-201ENST00000560515 784 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 IGHVIII-44-202ENST00000636235 289 ntBASIC3.08□□□□□ -1.92
SPTA1P02549 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.07□□□□□ -1.92
SPTA1P02549 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.07□□□□□ -1.92
SPTA1P02549 UBE3AP2-201ENST00000429033 2259 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
SPTA1P02549 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SPTA1P02549 AL357075.1-201ENST00000404107 726 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 RAP1BP1-201ENST00000412709 553 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 AC117434.1-201ENST00000419971 836 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.07□□□□□ -1.92
SPTA1P02549 AC004448.2-201ENST00000422360 586 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 AC108734.1-201ENST00000439549 399 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.07□□□□□ -1.92
SPTA1P02549 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.07□□□□□ -1.92
SPTA1P02549 AC021678.1-201ENST00000505195 936 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.07□□□□□ -1.92
SPTA1P02549 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.07□□□□□ -1.92
SPTA1P02549 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.07□□□□□ -1.92
SPTA1P02549 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.07□□□□□ -1.92
SPTA1P02549 MIR7154-201ENST00000620673 73 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 AC026422.1-201ENST00000623961 452 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.07□□□□□ -1.92
SPTA1P02549 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.07□□□□□ -1.92
SPTA1P02549 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SPTA1P02549 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms