Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 NMD3P1-201ENST00000439704 1488 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AP002001.2-201ENST00000529025 1469 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 RNU1-32P-201ENST00000363937 159 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 RNU6-356P-201ENST00000384140 107 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 RNU6-1176P-201ENST00000390955 107 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 EI24P2-201ENST00000397776 1076 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 MTATP6P31-201ENST00000406985 692 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AC016397.1-201ENST00000412463 242 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 RPL30P2-201ENST00000414021 291 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.8□□□□□ -1.8
KRT6AP02538 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.8□□□□□ -1.8
KRT6AP02538 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT6AP02538 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT6AP02538 RPL7P29-201ENST00000437151 728 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 RANP8-201ENST00000444720 713 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 HMGB3P30-201ENST00000457863 606 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 TRAV31-201ENST00000502780 342 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.8□□□□□ -1.8
KRT6AP02538 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT6AP02538 AC138701.1-201ENST00000524329 714 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.8□□□□□ -1.8
KRT6AP02538 NOP56P3-201ENST00000549457 385 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT6AP02538 AC012414.2-201ENST00000559474 187 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AC090751.1-201ENST00000566966 267 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.8□□□□□ -1.8
KRT6AP02538 RN7SL600P-201ENST00000581811 299 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
KRT6AP02538 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT6AP02538 AC098483.2-201ENST00000603158 454 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
KRT6AP02538 AC113194.1-201ENST00000606037 500 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AC242628.1-201ENST00000606810 391 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.8□□□□□ -1.8
KRT6AP02538 AC121761.2-201ENST00000617300 689 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 MIR7641-1-201ENST00000627518 61 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.8□□□□□ -1.8
KRT6AP02538 AC138649.5-201ENST00000637456 137 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.8□□□□□ -1.8
KRT6AP02538 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
KRT6AP02538 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 CASC19-261ENST00000641853 1638 ntBASIC3.8□□□□□ -1.8
KRT6AP02538 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.8□□□□□ -1.8
KRT6AP02538 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRT6AP02538 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
KRT6AP02538 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
KRT6AP02538 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
KRT6AP02538 DDX6P1-205ENST00000441966 1436 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
KRT6AP02538 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KRT6AP02538 MIR937-201ENST00000401271 86 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 HLFP1-201ENST00000402375 499 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.79□□□□□ -1.8
KRT6AP02538 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.79□□□□□ -1.8
KRT6AP02538 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.79□□□□□ -1.8
KRT6AP02538 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.79□□□□□ -1.8
KRT6AP02538 FAR1P1-201ENST00000427163 934 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.79□□□□□ -1.8
KRT6AP02538 AC092809.1-201ENST00000441469 474 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 ARL5AP2-201ENST00000444698 533 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 DNAJC19P1-201ENST00000455312 319 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 RPL21P11-201ENST00000461458 483 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.79□□□□□ -1.8
KRT6AP02538 OR9N1P-202ENST00000494289 481 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KRT6AP02538 COX6B1P6-201ENST00000522347 255 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 OR4A12P-201ENST00000530847 918 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.79□□□□□ -1.8
KRT6AP02538 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.79□□□□□ -1.8
KRT6AP02538 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.79□□□□□ -1.8
KRT6AP02538 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.79□□□□□ -1.8
KRT6AP02538 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.79□□□□□ -1.8
KRT6AP02538 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.79□□□□□ -1.8
KRT6AP02538 AC011458.1-201ENST00000604034 617 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 AL139022.2-201ENST00000606934 443 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 AC006946.3-201ENST00000609791 756 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 AL162233.1-201ENST00000620014 944 ntBASIC3.79□□□□□ -1.8
KRT6AP02538 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.79□□□□□ -1.8
KRT6AP02538 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KRT6AP02538 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KRT6AP02538 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KRT6AP02538 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
KRT6AP02538 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KRT6AP02538 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KRT6AP02538 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRT6AP02538 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRT6AP02538 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRT6AP02538 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRT6AP02538 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
KRT6AP02538 SNORA70E-201ENST00000384492 135 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms