Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC019193.2-201ENST00000610012 634 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 MAPK10-372ENST00000641954 3413 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AL353746.1-201ENST00000566293 6881 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 OR56B2P-202ENST00000641377 2453 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AC008432.1-201ENST00000615912 1320 ntBASIC2.93□□□□□ -1.94
HLA-DQA1P01909 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 SAGE2P-201ENST00000420011 2126 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 MIR16-2-201ENST00000362117 81 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 SNORD56.4-201ENST00000363883 71 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 RNVU1-6-201ENST00000364688 164 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 MIR129-1-201ENST00000384972 72 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 EI24P2-201ENST00000397776 1076 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 TMSB10P2-201ENST00000416049 131 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 RPS12P23-201ENST00000419579 400 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 RPS17P13-201ENST00000448974 407 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 Z95152.1-201ENST00000453556 656 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AL513533.1-201ENST00000453728 415 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 RPL37P6-202ENST00000464216 403 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 RPL7P1-201ENST00000468161 747 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 RPL7P9-201ENST00000468715 747 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC078857.1-201ENST00000469870 667 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 RPS29P22-201ENST00000472363 168 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC013356.1-201ENST00000489027 564 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 HMGB1P21-201ENST00000502313 581 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 IGBP1P5-201ENST00000507524 1000 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC106806.2-201ENST00000509365 500 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC093840.1-201ENST00000511599 336 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 NDUFB4P9-201ENST00000511646 388 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC008802.1-201ENST00000519121 791 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC008489.1-201ENST00000524271 483 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AP003049.1-201ENST00000529418 457 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AP000916.1-201ENST00000533869 835 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 TGIF1P1-201ENST00000558095 802 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC084783.1-201ENST00000565846 910 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC025627.2-201ENST00000576220 160 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC113403.1-201ENST00000604910 193 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC005972.3-201ENST00000606304 481 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC090948.1-201ENST00000607464 549 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC245100.7-201ENST00000609678 442 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC023043.4-201ENST00000612081 449 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 VN1R9P-201ENST00000614184 867 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AP000346.3-201ENST00000622821 210 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC020978.9-201ENST00000624380 1141 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC090229.1-201ENST00000590983 1609 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 MFSD8-236ENST00000641509 4050 ntBASIC2.92□□□□□ -1.94
HLA-DQA1P01909 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.92□□□□□ -1.94
HLA-DQA1P01909 AC012618.3-205ENST00000637896 1496 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 MIR331-201ENST00000362302 94 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 Y_RNA.110-201ENST00000363220 99 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 RNU6-283P-201ENST00000364788 107 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 UBE2V1P11-201ENST00000411559 285 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 PRELID3BP11-201ENST00000414230 479 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC006989.1-201ENST00000427212 131 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 HIGD1AP4-201ENST00000430194 280 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 MTCO1P43-201ENST00000431831 488 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DQA1P01909 AC023347.2-201ENST00000433994 462 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 RPS3AP54-201ENST00000435535 734 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 UBE2V1P5-201ENST00000440070 405 ntBASIC2.91□□□□□ -1.94
HLA-DQA1P01909 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms