Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFP01375 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFP01375 AC037471.2-201ENST00000564941 598 ntBASIC3.36□□□□□ -1.87
TNFP01375 MIR4644-201ENST00000579929 84 ntBASIC3.36□□□□□ -1.87
TNFP01375 BNIP3P38-201ENST00000601117 544 ntBASIC3.36□□□□□ -1.87
TNFP01375 AC110741.2-201ENST00000605278 268 ntBASIC3.36□□□□□ -1.87
TNFP01375 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFP01375 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFP01375 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFP01375 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
TNFP01375 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
TNFP01375 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 AC068647.1-201ENST00000489539 2265 ntBASIC3.36□□□□□ -1.87
TNFP01375 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 DDX6P1-205ENST00000441966 1436 ntBASIC3.36□□□□□ -1.87
TNFP01375 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
TNFP01375 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TNFP01375 AL049555.1-201ENST00000562834 1933 ntBASIC3.35□□□□□ -1.87
TNFP01375 AC008725.1-201ENST00000605123 2263 ntBASIC3.35□□□□□ -1.87
TNFP01375 XKRY2-202ENST00000623874 1581 ntBASIC3.35□□□□□ -1.87
TNFP01375 XKRY-202ENST00000624960 1581 ntBASIC3.35□□□□□ -1.87
TNFP01375 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFP01375 AL391417.1-201ENST00000404100 426 ntBASIC3.35□□□□□ -1.87
TNFP01375 RNA5SP239-201ENST00000410218 129 ntBASIC3.35□□□□□ -1.87
TNFP01375 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.35□□□□□ -1.87
TNFP01375 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
TNFP01375 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFP01375 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFP01375 AC005300.1-201ENST00000428401 373 ntBASIC3.35□□□□□ -1.87
TNFP01375 AC074367.1-201ENST00000438685 1125 ntBASIC3.35□□□□□ -1.87
TNFP01375 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFP01375 AL357552.1-201ENST00000445254 415 ntBASIC3.35□□□□□ -1.87
TNFP01375 RPS29P31-201ENST00000446147 164 ntBASIC3.35□□□□□ -1.87
TNFP01375 AC022431.1-201ENST00000450941 438 ntBASIC3.35□□□□□ -1.87
TNFP01375 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
TNFP01375 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFP01375 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TNFP01375 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.35□□□□□ -1.87
TNFP01375 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFP01375 AC009101.1-201ENST00000568135 242 ntBASIC3.35□□□□□ -1.87
TNFP01375 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFP01375 MIR4276-201ENST00000584832 70 ntBASIC3.35□□□□□ -1.87
TNFP01375 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFP01375 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFP01375 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFP01375 AC091953.5-201ENST00000622919 233 ntBASIC3.35□□□□□ -1.87
TNFP01375 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TNFP01375 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFP01375 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFP01375 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFP01375 AL133383.2-201ENST00000622958 2336 ntBASIC3.35□□□□□ -1.87
TNFP01375 AC032011.1-201ENST00000611703 1549 ntBASIC3.34□□□□□ -1.87
TNFP01375 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFP01375 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFP01375 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFP01375 RNU6-525P-201ENST00000363685 104 ntBASIC3.34□□□□□ -1.87
TNFP01375 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFP01375 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFP01375 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TNFP01375 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.34□□□□□ -1.87
TNFP01375 OSTCP5-201ENST00000425293 453 ntBASIC3.34□□□□□ -1.87
TNFP01375 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.34□□□□□ -1.87
TNFP01375 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFP01375 FTH1P6-201ENST00000430768 320 ntBASIC3.34□□□□□ -1.87
TNFP01375 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.34□□□□□ -1.87
TNFP01375 RPL12P46-201ENST00000436610 195 ntBASIC3.34□□□□□ -1.87
TNFP01375 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TNFP01375 IFNWP4-201ENST00000453148 294 ntBASIC3.34□□□□□ -1.87
TNFP01375 BTF3P5-201ENST00000457252 467 ntBASIC3.34□□□□□ -1.87
TNFP01375 RPS3AP50-201ENST00000487064 803 ntBASIC3.34□□□□□ -1.87
TNFP01375 HMGB1P21-201ENST00000502313 581 ntBASIC3.34□□□□□ -1.87
TNFP01375 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.34□□□□□ -1.87
TNFP01375 SNORA74D-201ENST00000516404 141 ntBASIC3.34□□□□□ -1.87
TNFP01375 SNORA70.19-201ENST00000516717 90 ntBASIC3.34□□□□□ -1.87
TNFP01375 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.34□□□□□ -1.87
TNFP01375 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFP01375 OR5AP1P-201ENST00000529730 940 ntBASIC3.34□□□□□ -1.87
TNFP01375 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.34□□□□□ -1.87
TNFP01375 UBE2NP1-201ENST00000545592 458 ntBASIC3.34□□□□□ -1.87
TNFP01375 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFP01375 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.34□□□□□ -1.87
TNFP01375 AC099489.2-201ENST00000574976 260 ntBASIC3.34□□□□□ -1.87
TNFP01375 MIR3651-201ENST00000630427 90 ntBASIC3.34□□□□□ -1.87
TNFP01375 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.34□□□□□ -1.87
TNFP01375 AL356274.2-201ENST00000624379 3752 ntBASIC3.34□□□□□ -1.88
TNFP01375 AC095050.2-201ENST00000510748 1458 ntBASIC3.34□□□□□ -1.88
TNFP01375 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TNFP01375 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TNFP01375 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFP01375 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.33□□□□□ -1.88
TNFP01375 RNU1-18P-201ENST00000363062 164 ntBASIC3.33□□□□□ -1.88
TNFP01375 RNU6-283P-201ENST00000364788 107 ntBASIC3.33□□□□□ -1.88
TNFP01375 RNU6-1263P-201ENST00000384601 106 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms