Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.39□□□□□ -1.87
SGCEO43556 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.39□□□□□ -1.87
SGCEO43556 AC022079.2-201ENST00000619739 566 ntBASIC3.39□□□□□ -1.87
SGCEO43556 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.39□□□□□ -1.87
SGCEO43556 ATE1-AS1-202ENST00000636460 506 ntBASIC3.39□□□□□ -1.87
SGCEO43556 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SGCEO43556 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SGCEO43556 GABPAP-201ENST00000419271 1356 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SGCEO43556 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 MIR199A2-201ENST00000385289 110 ntBASIC3.38□□□□□ -1.87
SGCEO43556 HLFP1-201ENST00000402375 499 ntBASIC3.38□□□□□ -1.87
SGCEO43556 MTHFD2P2-201ENST00000407725 247 ntBASIC3.38□□□□□ -1.87
SGCEO43556 RN7SKP285-201ENST00000410137 318 ntBASIC3.38□□□□□ -1.87
SGCEO43556 RNU2-37P-201ENST00000410695 177 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.38□□□□□ -1.87
SGCEO43556 AC234782.4-201ENST00000417646 1048 ntBASIC3.38□□□□□ -1.87
SGCEO43556 RPS15AP6-201ENST00000420703 385 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.38□□□□□ -1.87
SGCEO43556 YY1P1-201ENST00000427625 668 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AL117339.2-201ENST00000430475 180 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.38□□□□□ -1.87
SGCEO43556 MTCYBP31-201ENST00000438855 1122 ntBASIC3.38□□□□□ -1.87
SGCEO43556 RPS7P5-201ENST00000441482 581 ntBASIC3.38□□□□□ -1.87
SGCEO43556 ARL5AP2-201ENST00000444698 533 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 RPL37P6-202ENST00000464216 403 ntBASIC3.38□□□□□ -1.87
SGCEO43556 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SGCEO43556 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.38□□□□□ -1.87
SGCEO43556 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.38□□□□□ -1.87
SGCEO43556 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.38□□□□□ -1.87
SGCEO43556 FTH1P21-201ENST00000512179 511 ntBASIC3.38□□□□□ -1.87
SGCEO43556 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.38□□□□□ -1.87
SGCEO43556 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.38□□□□□ -1.87
SGCEO43556 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.38□□□□□ -1.87
SGCEO43556 AC099489.2-201ENST00000574976 260 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AP000919.1-202ENST00000581139 1264 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.38□□□□□ -1.87
SGCEO43556 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 AC015726.1-201ENST00000602353 681 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AL606490.9-201ENST00000603331 271 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.38□□□□□ -1.87
SGCEO43556 AC018754.1-201ENST00000607486 925 ntBASIC3.38□□□□□ -1.87
SGCEO43556 RNVU1-4-201ENST00000612985 164 ntBASIC3.38□□□□□ -1.87
SGCEO43556 XIST_intron.1-201ENST00000619444 68 ntBASIC3.38□□□□□ -1.87
SGCEO43556 AC073530.2-201ENST00000623987 261 ntBASIC3.38□□□□□ -1.87
SGCEO43556 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 AF001550.2-201ENST00000636643 217 ntBASIC3.38□□□□□ -1.87
SGCEO43556 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SGCEO43556 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SGCEO43556 AL133383.2-201ENST00000622958 2336 ntBASIC3.38□□□□□ -1.87
SGCEO43556 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.38□□□□□ -1.87
SGCEO43556 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SGCEO43556 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SGCEO43556 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.38□□□□□ -1.87
SGCEO43556 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SGCEO43556 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
SGCEO43556 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SGCEO43556 MIR372-201ENST00000362225 67 ntBASIC3.37□□□□□ -1.87
SGCEO43556 RNU6-819P-201ENST00000364116 107 ntBASIC3.37□□□□□ -1.87
SGCEO43556 MIR184-201ENST00000384962 84 ntBASIC3.37□□□□□ -1.87
SGCEO43556 HMGN2P8-201ENST00000391458 268 ntBASIC3.37□□□□□ -1.87
SGCEO43556 RNU6-628P-201ENST00000410675 107 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.37□□□□□ -1.87
SGCEO43556 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SGCEO43556 OR8F1P-201ENST00000425243 930 ntBASIC3.37□□□□□ -1.87
SGCEO43556 OR5AW1P-201ENST00000426334 1006 ntBASIC3.37□□□□□ -1.87
SGCEO43556 OR4C10P-201ENST00000434991 931 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AC092809.1-201ENST00000441469 474 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.37□□□□□ -1.87
SGCEO43556 AC098824.1-201ENST00000453565 980 ntBASIC3.37□□□□□ -1.87
SGCEO43556 MTCO3P20-201ENST00000454926 688 ntBASIC3.37□□□□□ -1.87
SGCEO43556 DNAJC19P1-201ENST00000455312 319 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AC010468.1-201ENST00000461022 817 ntBASIC3.37□□□□□ -1.87
SGCEO43556 RPS20P21-201ENST00000466859 343 ntBASIC3.37□□□□□ -1.87
SGCEO43556 TPT1P3-201ENST00000492841 512 ntBASIC3.37□□□□□ -1.87
SGCEO43556 UBE2CP3-201ENST00000502715 450 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AC004069.2-201ENST00000505438 1114 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AC090071.1-201ENST00000507713 644 ntBASIC3.37□□□□□ -1.87
SGCEO43556 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SGCEO43556 SNORA70.17-201ENST00000516449 133 ntBASIC3.37□□□□□ -1.87
SGCEO43556 RNU4-60P-201ENST00000517239 135 ntBASIC3.37□□□□□ -1.87
SGCEO43556 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.37□□□□□ -1.87
SGCEO43556 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.37□□□□□ -1.87
SGCEO43556 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.37□□□□□ -1.87
SGCEO43556 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.37□□□□□ -1.87
SGCEO43556 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
SGCEO43556 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.37□□□□□ -1.87
SGCEO43556 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.37□□□□□ -1.87
SGCEO43556 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.37□□□□□ -1.87
SGCEO43556 AC090877.1-201ENST00000561418 344 ntBASIC3.37□□□□□ -1.87
SGCEO43556 AC136624.4-201ENST00000573044 370 ntBASIC3.37□□□□□ -1.87
SGCEO43556 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms