Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL023807.1-201ENST00000407932 359 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 RNU2-28P-201ENST00000410457 189 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AC069218.2-201ENST00000411665 344 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF3O43395 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PRPF3O43395 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF3O43395 Z80107.2-201ENST00000445127 392 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 Z83846.1-201ENST00000446798 265 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF3O43395 SLC31A1P1-201ENST00000451221 567 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 LINC00888-204ENST00000487386 421 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF3O43395 ARL4AP1-201ENST00000503220 705 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF3O43395 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF3O43395 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF3O43395 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF3O43395 MRPS33P3-201ENST00000513456 322 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 OR5AK1P-201ENST00000524837 922 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.32□□□□□ -1.56
PRPF3O43395 AP000790.1-201ENST00000528891 737 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 CYCSP28-201ENST00000534284 321 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AC007834.2-201ENST00000536310 343 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 OSBPL9P5-201ENST00000542581 171 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 ELOCP32-201ENST00000548625 324 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF3O43395 ISCA1P3-201ENST00000577104 373 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AC005412.1-201ENST00000580812 1049 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AC107982.3-201ENST00000584957 985 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF3O43395 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.32□□□□□ -1.56
PRPF3O43395 AC245297.2-201ENST00000610119 565 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 AC097505.1-201ENST00000610199 565 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.32□□□□□ -1.56
PRPF3O43395 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.32□□□□□ -1.56
PRPF3O43395 AL049555.1-201ENST00000562834 1933 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF3O43395 AL079343.1-201ENST00000572358 1771 ntBASIC5.32□□□□□ -1.56
PRPF3O43395 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PRPF3O43395 OR14L1P-202ENST00000641545 3009 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF3O43395 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF3O43395 MTND4P34-201ENST00000572715 1371 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
PRPF3O43395 MFSD8-216ENST00000641147 4009 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PRPF3O43395 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 SNORD113.2-201ENST00000364166 89 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 RSL24D1P4-201ENST00000400938 484 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF3O43395 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF3O43395 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF3O43395 NIPA2P1-201ENST00000426223 976 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.31□□□□□ -1.56
PRPF3O43395 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF3O43395 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF3O43395 SETD6P1-201ENST00000444575 317 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 GEMIN8P3-201ENST00000445417 720 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 AC073264.2-201ENST00000448886 166 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF3O43395 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF3O43395 USP9YP10-201ENST00000454868 628 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF3O43395 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 MTATP6P22-201ENST00000507369 598 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 HMGB1P28-201ENST00000507778 552 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 USP9YP5-201ENST00000511770 630 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.31□□□□□ -1.56
PRPF3O43395 RNA5SP446-201ENST00000515955 82 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 NPM1P6-201ENST00000521088 871 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
PRPF3O43395 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF3O43395 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF3O43395 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.31□□□□□ -1.56
PRPF3O43395 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.31□□□□□ -1.56
PRPF3O43395 AL353778.1-201ENST00000603149 408 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 AL133338.2-201ENST00000604292 736 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF3O43395 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF3O43395 OR8B1P-202ENST00000641132 1178 ntBASIC5.31□□□□□ -1.56
PRPF3O43395 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PRPF3O43395 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF3O43395 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PRPF3O43395 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.31□□□□□ -1.56
PRPF3O43395 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
PRPF3O43395 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PRPF3O43395 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms