Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNU4-31P-201ENST00000384211 141 ntBASIC4.06□□□□□ -1.76
MSH4O15457 MIR670-201ENST00000390142 98 ntBASIC4.06□□□□□ -1.76
MSH4O15457 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MSH4O15457 RNU4-74P-201ENST00000411280 161 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC013404.1-201ENST00000413068 249 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC069157.1-201ENST00000421749 137 ntBASIC4.06□□□□□ -1.76
MSH4O15457 MTND4P24-201ENST00000424002 397 ntBASIC4.06□□□□□ -1.76
MSH4O15457 CYCSP4-201ENST00000429682 331 ntBASIC4.06□□□□□ -1.76
MSH4O15457 ZNF965P-201ENST00000432501 817 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AL691517.1-201ENST00000440833 1235 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AL357520.1-201ENST00000441557 453 ntBASIC4.06□□□□□ -1.76
MSH4O15457 RPS15AP29-201ENST00000445539 400 ntBASIC4.06□□□□□ -1.76
MSH4O15457 RPL34P26-201ENST00000445636 354 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC073387.1-201ENST00000453261 709 ntBASIC4.06□□□□□ -1.76
MSH4O15457 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.06□□□□□ -1.76
MSH4O15457 SNORD105B-201ENST00000458770 79 ntBASIC4.06□□□□□ -1.76
MSH4O15457 RPL23AP71-201ENST00000470966 469 ntBASIC4.06□□□□□ -1.76
MSH4O15457 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.06□□□□□ -1.76
MSH4O15457 AC025459.1-201ENST00000504072 156 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.06□□□□□ -1.76
MSH4O15457 VWA8P1-201ENST00000510889 176 ntBASIC4.06□□□□□ -1.76
MSH4O15457 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.06□□□□□ -1.76
MSH4O15457 RN7SKP83-201ENST00000516512 178 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.06□□□□□ -1.76
MSH4O15457 IGKV2D-19-201ENST00000523346 262 ntBASIC4.06□□□□□ -1.76
MSH4O15457 HAUS1P3-201ENST00000523909 662 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC008489.1-201ENST00000524271 483 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.06□□□□□ -1.76
MSH4O15457 PDCD5P1-201ENST00000543528 309 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.06□□□□□ -1.76
MSH4O15457 KLKP1-201ENST00000595979 403 ntBASIC4.06□□□□□ -1.76
MSH4O15457 BNIP3P33-201ENST00000598912 569 ntBASIC4.06□□□□□ -1.76
MSH4O15457 SUMO2P14-201ENST00000604488 293 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC006077.1-201ENST00000604746 343 ntBASIC4.06□□□□□ -1.76
MSH4O15457 RMST_9.1-201ENST00000619945 193 ntBASIC4.06□□□□□ -1.76
MSH4O15457 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.06□□□□□ -1.76
MSH4O15457 AC012020.1-201ENST00000624541 1728 ntBASIC4.06□□□□□ -1.76
MSH4O15457 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
MSH4O15457 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
MSH4O15457 AC100871.1-201ENST00000507871 1456 ntBASIC4.05□□□□□ -1.76
MSH4O15457 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MSH4O15457 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MSH4O15457 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MSH4O15457 AL589826.1-201ENST00000340697 249 ntBASIC4.05□□□□□ -1.76
MSH4O15457 RNU1-18P-201ENST00000363062 164 ntBASIC4.05□□□□□ -1.76
MSH4O15457 SNORA62.2-201ENST00000364672 152 ntBASIC4.05□□□□□ -1.76
MSH4O15457 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
MSH4O15457 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 RNU1-89P-201ENST00000384592 164 ntBASIC4.05□□□□□ -1.76
MSH4O15457 RNU6-146P-201ENST00000384602 108 ntBASIC4.05□□□□□ -1.76
MSH4O15457 MIR449B-201ENST00000384995 97 ntBASIC4.05□□□□□ -1.76
MSH4O15457 RNA5SP171-201ENST00000391071 115 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC010385.1-201ENST00000412374 256 ntBASIC4.05□□□□□ -1.76
MSH4O15457 NPM1P24-201ENST00000428039 894 ntBASIC4.05□□□□□ -1.76
MSH4O15457 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 HMGN2P31-201ENST00000432430 273 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.05□□□□□ -1.76
MSH4O15457 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.05□□□□□ -1.76
MSH4O15457 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.05□□□□□ -1.76
MSH4O15457 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.05□□□□□ -1.76
MSH4O15457 AC093663.2-201ENST00000484625 313 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.05□□□□□ -1.76
MSH4O15457 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.05□□□□□ -1.76
MSH4O15457 RPS6P4-201ENST00000494693 758 ntBASIC4.05□□□□□ -1.76
MSH4O15457 FTH1P24-201ENST00000503502 462 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC006499.5-201ENST00000505037 514 ntBASIC4.05□□□□□ -1.76
MSH4O15457 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.05□□□□□ -1.76
MSH4O15457 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.05□□□□□ -1.76
MSH4O15457 RN7SKP157-201ENST00000516174 282 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC090281.1-201ENST00000523019 276 ntBASIC4.05□□□□□ -1.76
MSH4O15457 SMARCE1P4-201ENST00000523647 241 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.05□□□□□ -1.76
MSH4O15457 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.05□□□□□ -1.76
MSH4O15457 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.05□□□□□ -1.76
MSH4O15457 CCNG2P1-201ENST00000549521 1000 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 CKS1BP1-201ENST00000555221 240 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.05□□□□□ -1.76
MSH4O15457 CBX3P2-202ENST00000583365 535 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.05□□□□□ -1.76
MSH4O15457 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.05□□□□□ -1.76
MSH4O15457 AC025016.1-201ENST00000616746 682 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC069209.1-201ENST00000619282 651 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AL356490.1-201ENST00000623079 479 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC015726.3-201ENST00000624501 418 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AL732372.2-225ENST00000642124 456 ntBASIC4.05□□□□□ -1.76
MSH4O15457 AC006504.1-201ENST00000562493 3666 ntBASIC4.05□□□□□ -1.76
MSH4O15457 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MSH4O15457 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.05□□□□□ -1.76
MSH4O15457 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.05□□□□□ -1.76
MSH4O15457 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.04□□□□□ -1.76
MSH4O15457 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MSH4O15457 RNA5SP42-201ENST00000364278 115 ntBASIC4.04□□□□□ -1.76
MSH4O15457 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms