Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 IGKV3D-34-201ENST00000522638 302 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 MTCYBP41-201ENST00000528913 1123 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 CYCSP29-201ENST00000533731 318 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 OR8L1P-201ENST00000534005 955 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 CENPUP2-201ENST00000555897 1186 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC090695.1-201ENST00000561269 1222 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC234775.3-201ENST00000564612 656 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC006116.3-201ENST00000592968 361 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC096947.1-201ENST00000603233 470 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AL713998.2-201ENST00000604538 1198 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC073387.2-201ENST00000604797 784 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC022001.1-201ENST00000605193 268 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC007620.3-201ENST00000608131 497 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AL049539.1-201ENST00000611964 459 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AL591926.1-201ENST00000620542 217 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC022509.4-201ENST00000621404 572 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC112694.2-201ENST00000623697 768 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 RARSP1-201ENST00000542842 1418 ntBASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
CHKB-CPT1BH3BT56 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC068647.1-201ENST00000489539 2265 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC026951.1-201ENST00000559530 2459 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP399-201ENST00000364003 117 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR320B1-201ENST00000390209 79 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 RPS3AP26-201ENST00000398259 784 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 MTND4P13-201ENST00000402078 1023 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR1286-201ENST00000408112 78 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 SNORD88.1-201ENST00000408684 91 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC245054.2-201ENST00000415639 319 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 RAD23BP2-201ENST00000416003 1207 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 TMSB10P2-201ENST00000416049 131 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC108032.1-201ENST00000416706 207 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC023128.2-201ENST00000420880 1223 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 RPL23AP19-201ENST00000436229 369 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC074367.1-201ENST00000438685 1125 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 SETD6P1-201ENST00000444575 317 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 Z96811.1-201ENST00000445880 108 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 TRY2P-201ENST00000448860 689 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 CYCSP35-201ENST00000451978 304 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 RNA5SP246-201ENST00000458909 119 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC021205.1-201ENST00000468797 348 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 RN7SL174P-201ENST00000475578 289 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 GAPDHP36-201ENST00000480688 918 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC110792.2-201ENST00000510278 224 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 SNORA31.15-201ENST00000516771 132 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 MIR2276-201ENST00000516886 89 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC021006.3-201ENST00000530771 192 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC135626.1-201ENST00000556983 435 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC138761.3-201ENST00000579993 334 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC087763.1-201ENST00000603391 286 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AC022149.2-201ENST00000621061 203 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AP003497.2-201ENST00000624220 967 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AL136520.1-201ENST00000600311 1322 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 AL158163.1-201ENST00000603915 1649 ntBASIC1.88□□□□□ -2.11
CHKB-CPT1BH3BT56 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 CR788268.1-201ENST00000603931 1809 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC233263.6-201ENST00000631132 1963 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 METTL21EP-201ENST00000298105 713 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC092638.1-201ENST00000411966 1275 ntBASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC1.87□□□□□ -2.11
CHKB-CPT1BH3BT56 COX6B1P1-201ENST00000415962 213 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms