Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 OR6K3-202ENST00000368146 996 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 RNU6-225P-201ENST00000384613 103 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 Z86062.1-201ENST00000406773 777 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 MTND4P22-201ENST00000413116 1169 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 SDCBPP2-201ENST00000424643 885 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC108064.1-201ENST00000513791 460 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 RNU6-1231P-201ENST00000517185 103 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AP003049.1-201ENST00000529418 457 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AL109741.3-201ENST00000561748 592 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 MIR4716-201ENST00000579628 84 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 ZNF92P2-201ENST00000600543 1059 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AC004775.1-201ENST00000607389 753 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AL163051.2-201ENST00000618976 735 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AL445493.3-201ENST00000619568 477 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 AP002371.2-201ENST00000624450 503 ntBASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49D1C9J1S8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 MIR30E-201ENST00000362104 92 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 MIR372-201ENST00000362225 67 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 RNU6-1251P-201ENST00000364502 107 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 SNORD51.1-201ENST00000365405 77 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 RNU6-1005P-201ENST00000384519 107 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL356967.1-201ENST00000406305 431 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 U3.39-201ENST00000408569 239 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 MTCYBP7-201ENST00000419540 1134 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL139247.1-201ENST00000422768 325 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 OR8F1P-201ENST00000425243 930 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL117339.2-201ENST00000430475 180 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL512661.1-201ENST00000434586 1253 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 ARL5AP3-201ENST00000439327 386 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 BUD31P2-201ENST00000449374 300 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 RPL7P31-201ENST00000450192 724 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 HMGB3P21-201ENST00000452483 547 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC069277.2-201ENST00000454211 432 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL161747.1-201ENST00000480068 358 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 RN7SKP21-201ENST00000516503 220 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 RNU6-579P-201ENST00000516879 102 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC019227.1-201ENST00000526902 510 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC011602.1-201ENST00000546484 331 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AGGF1P8-201ENST00000562979 1000 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 SS18L2P2-201ENST00000583960 235 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 BNIP3P39-201ENST00000601077 554 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC092653.1-201ENST00000608509 531 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 OR6R2P-201ENST00000609216 300 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC023043.4-201ENST00000612081 449 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL357559.1-201ENST00000622228 274 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC000123.2-201ENST00000623124 461 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC068724.3-201ENST00000625906 87 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC106858.1-201ENST00000637497 429 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AL359715.4-201ENST00000606629 1436 ntBASIC3.6□□□□□ -1.83
TRIM49D1C9J1S8 AC095050.2-201ENST00000510748 1458 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms