Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-492P-201ENST00000363035 104 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-115P-201ENST00000364310 107 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 RNA5SP87-201ENST00000384155 118 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 RNA5SP397-201ENST00000391323 118 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 RPL23AP47-201ENST00000408017 460 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 MIR1911-201ENST00000410783 80 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 FCF1P2-201ENST00000415284 583 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AL513175.1-201ENST00000431492 780 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 VN1R54P-201ENST00000435210 1049 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC241584.1-201ENST00000438469 1241 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 GEMIN8P3-201ENST00000445417 720 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 RPL12P26-201ENST00000452430 487 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC097262.1-201ENST00000452559 548 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 MTND1P16-201ENST00000465177 898 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC092324.1-201ENST00000468671 324 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC006511.1-201ENST00000470614 315 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 BZW1P2-201ENST00000473537 826 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC022795.1-201ENST00000473808 480 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC008638.1-201ENST00000506035 866 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 XKRY-201ENST00000510392 1100 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-488P-201ENST00000515918 99 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AL121834.1-201ENST00000572284 509 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC005084.1-201ENST00000605160 304 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC124312.4-201ENST00000605533 310 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AL354760.1-201ENST00000608357 643 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 FAM25E-202ENST00000608562 189 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC122133.1-201ENST00000613964 233 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC125257.1-201ENST00000560400 2930 ntBASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
TCRBV7S3A2A0A539 AC104118.1-201ENST00000607625 1589 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 RNU1-130P-201ENST00000363930 160 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-1200P-201ENST00000384162 107 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 SDHCP2-201ENST00000398565 501 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 RNU2-50P-201ENST00000410494 143 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 UBTFL3-201ENST00000418934 1024 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AL358176.3-201ENST00000420757 454 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC073335.1-201ENST00000427776 363 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 RPL37P1-201ENST00000432310 284 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 RPL12P3-201ENST00000440080 396 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 RPS26P28-201ENST00000470806 348 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 UBTFL6-201ENST00000477929 1024 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC147055.4-201ENST00000504399 745 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC025674.1-201ENST00000507074 324 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 PPBPP1-201ENST00000510807 373 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 KRT19P6-201ENST00000510983 209 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms