Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 MAPK10-303ENST00000641324 3959 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AP001486.2-201ENST00000561652 5113 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AL355852.1-201ENST00000454081 1771 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 ZNF849P-201ENST00000594711 1566 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 ENSAP1-201ENST00000392855 326 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AL592291.1-201ENST00000403830 352 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6ATAC-201ENST00000408749 126 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6-77P-201ENST00000410554 91 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 CYCSP19-201ENST00000411715 316 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC069282.1-201ENST00000411911 526 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RPL21P43-201ENST00000425440 472 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC013262.1-201ENST00000426710 252 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 PSMA2P3-201ENST00000429685 675 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 SDR42E1P3-201ENST00000438345 502 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RPL23AP15-201ENST00000450202 459 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 SNRPGP5-201ENST00000456003 220 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC015724.1-201ENST00000478577 156 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC099522.1-202ENST00000514718 367 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 Vault.1-201ENST00000516474 102 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RNA5SP143-201ENST00000516936 115 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 OR6C73P-201ENST00000546432 358 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC005156.1-201ENST00000613371 573 ntBASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHGA1Q9Y5H4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC139769.1-204ENST00000472297 1931 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 KPNA2P2-201ENST00000419546 1489 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 OR56B2P-201ENST00000317102 954 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU1-14P-201ENST00000362759 152 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6-1293P-201ENST00000384077 107 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6-1151P-201ENST00000384684 107 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 SNORD65C-201ENST00000390962 71 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AL355615.1-201ENST00000406187 641 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 MIR1250-201ENST00000408098 113 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 RNA5SP146-201ENST00000410743 123 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 OR8G2P-201ENST00000412796 908 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC092832.1-201ENST00000422934 400 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AL157831.1-201ENST00000426134 473 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AL050321.1-201ENST00000432363 400 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 GXYLT1P1-201ENST00000446657 490 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 VN1R32P-201ENST00000452234 905 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 RPL21P71-201ENST00000465598 459 ntBASIC4.19□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms