Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 REG1CP-206ENST00000447469 496 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 CBX1P2-201ENST00000453841 458 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 RPL36AP55-201ENST00000454114 305 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU7-66P-201ENST00000459469 62 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 CR383656.1-201ENST00000484916 377 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC068305.1-201ENST00000497406 726 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 TRBVA-201ENST00000498804 316 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 MINOS1P4-201ENST00000515470 318 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-1088P-201ENST00000516850 104 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-794P-201ENST00000517261 64 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 MYL12AP1-201ENST00000518490 515 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 COPS8P3-201ENST00000526024 482 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 COX6CP5-201ENST00000527162 228 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC110588.1-201ENST00000559699 137 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR4790-201ENST00000577799 79 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AP000654.2-201ENST00000605633 586 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AL136984.1-201ENST00000607611 1893 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC090425.1-201ENST00000610007 140 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC116165.3-201ENST00000614524 400 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 OR52H1-202ENST00000641796 1061 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC121333.1-201ENST00000567488 2709 ntBASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGA11Q9Y5H2 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 PPIAP24-201ENST00000328558 471 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU6-179P-201ENST00000363350 107 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 RNA5SP140-201ENST00000364524 92 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 MRPS6P2-201ENST00000381143 370 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR431-201ENST00000385266 114 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC026310.1-201ENST00000396004 378 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 PSMA6P1-201ENST00000400275 741 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 RNA5SP231-201ENST00000410496 138 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AL358176.3-201ENST00000420757 454 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC007568.1-201ENST00000422912 471 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 SPATA20P1-201ENST00000423089 438 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 MTCYBP10-201ENST00000424905 650 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 FABP5P14-201ENST00000437273 393 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 PRPF38AP2-201ENST00000438179 851 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 HMGB3P11-201ENST00000440127 604 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 RPL21P89-201ENST00000444021 467 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 NOP56P2-201ENST00000447491 769 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 CFL1P4-201ENST00000451536 498 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC079168.1-201ENST00000458741 345 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 RN7SL350P-201ENST00000492591 299 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AL139099.1-201ENST00000497398 403 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 MTCYBP40-201ENST00000509390 1135 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 PTP4A1P4-201ENST00000512479 322 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC078899.1-201ENST00000521432 1185 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AP003122.3-201ENST00000526316 255 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC012175.1-201ENST00000603755 531 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC090510.2-201ENST00000617465 629 ntBASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGA11Q9Y5H2 AC073488.9-201ENST00000631601 754 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms