Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MTND1P34-201ENST00000438556 671 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 TRIM60P18-201ENST00000441518 828 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AL591623.2-201ENST00000449978 222 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 HIGD1AP8-201ENST00000453927 274 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 SNRPGP9-201ENST00000456025 225 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC092490.3-201ENST00000545370 572 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 NMNAT1P1-201ENST00000554095 876 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 OR1F2P-201ENST00000570470 933 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC012213.3-201ENST00000577199 777 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC119751.7-201ENST00000600494 245 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AC107214.2-201ENST00000608204 634 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 MIR6748-201ENST00000610433 71 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AL121873.1-201ENST00000616013 524 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 AL731532.2-201ENST00000623542 1953 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 MTND4P4-201ENST00000439033 1366 ntBASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHGA3Q9Y5H0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC104964.3-201ENST00000606115 2860 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU6-433P-201ENST00000363216 104 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 Y_RNA.559-201ENST00000384686 107 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC007066.1-201ENST00000392902 381 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 BTBD10P2-201ENST00000404779 676 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 VN1R8P-201ENST00000407739 893 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 MIR320C1-201ENST00000408566 88 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 CENPIP1-201ENST00000425713 902 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 NPM1P34-201ENST00000428821 893 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 H2AFZP6-201ENST00000444403 394 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 COX6CP12-201ENST00000446748 202 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 Z92846.1-201ENST00000456203 268 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AP000942.1-201ENST00000463969 747 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 RPL30P9-201ENST00000465586 330 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC106872.3-201ENST00000495104 446 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC090453.1-201ENST00000495560 436 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 POU5F1P7-201ENST00000508759 541 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 RNU2-30P-201ENST00000516209 141 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC104986.1-201ENST00000517978 436 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC060788.1-201ENST00000521318 469 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AL390726.5-202ENST00000564800 256 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC006362.1-201ENST00000567392 174 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 MIR4436B2-201ENST00000581415 91 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC233702.9-201ENST00000581528 203 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 MIR4436B1-201ENST00000583272 91 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC083760.1-201ENST00000589621 670 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AL391497.1-201ENST00000608671 547 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC099494.2-201ENST00000623371 978 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 AC130650.2-201ENST00000618736 2403 ntBASIC5.11□□□□□ -1.59
PCDHGA3Q9Y5H0 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA3Q9Y5H0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms