Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MTCO2P34-201ENST00000421994 607 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 OR2AM1P-201ENST00000422137 422 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 BMS1P19-201ENST00000433925 393 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AL512286.1-201ENST00000439244 400 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 TCEA1P3-201ENST00000443005 880 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 RPS26P56-201ENST00000444468 240 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 RPL7P16-201ENST00000479738 738 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 RPL5P22-201ENST00000480199 884 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 MTCYBP17-201ENST00000503579 789 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AF213884.2-201ENST00000510417 903 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AL359219.2-201ENST00000555184 348 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 SULT1C2P1-202ENST00000562418 459 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC007599.1-201ENST00000568688 1174 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC136618.2-201ENST00000575091 400 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC080078.2-201ENST00000603766 501 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC087752.4-201ENST00000605911 462 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AP005432.2-201ENST00000608162 586 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC104073.3-201ENST00000610942 955 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AL356266.1-201ENST00000623311 483 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AP000648.2-201ENST00000624182 404 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 MTCO1P14-201ENST00000441695 1559 ntBASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB1Q9Y5F3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC005332.5-201ENST00000591222 2919 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL121657.1-201ENST00000327215 531 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 RNU1-85P-201ENST00000364127 164 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 PGBD4P8-201ENST00000412993 562 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 HMGN2P27-201ENST00000427352 270 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 TRIM60P18-201ENST00000441518 828 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC002553.2-201ENST00000453217 340 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 RPS4XP15-201ENST00000489210 795 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC026412.2-201ENST00000512270 1075 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 OR7H2P-201ENST00000513483 306 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 MTCYBP43-201ENST00000513621 740 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 RAB9BP1-201ENST00000519581 626 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AP000790.1-201ENST00000528891 737 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AC087276.1-201ENST00000529659 480 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 EIF5A2P1-201ENST00000564027 460 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 KPNA2P3-201ENST00000584190 848 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 MIR3611-201ENST00000584484 83 ntBASIC5.06□□□□□ -1.6
PCDHB1Q9Y5F3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms