Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC241520.1-201ENST00000422654 1099 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 RPL23AP1-201ENST00000428990 471 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 IFNNP1-201ENST00000429219 553 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 HMGB3P8-201ENST00000449709 577 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 MIR4646-201ENST00000580775 63 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC017100.2-201ENST00000584628 355 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC112503.1-201ENST00000608436 391 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AL512506.1-201ENST00000613918 449 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC109780.1-201ENST00000451768 1344 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 USP8P1-201ENST00000494673 3183 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 MTND5P28-201ENST00000438005 1594 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 MTND5P3-201ENST00000438536 1800 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 METTL5-202ENST00000308099 629 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 RNU1-14P-201ENST00000362759 152 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 RNA5SP435-201ENST00000364044 108 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 DSTNP4-201ENST00000399472 474 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 RNA5SP36-201ENST00000410197 133 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 RNU6-77P-201ENST00000410554 91 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 RNU6-272P-201ENST00000411028 104 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC007390.1-201ENST00000415722 356 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 RPL21P110-201ENST00000433345 446 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC008072.1-201ENST00000434254 824 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 MTCYBP31-201ENST00000438855 1122 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 RPL23AP33-201ENST00000442301 452 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 HMGN2P21-201ENST00000447764 270 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 RPL12P26-201ENST00000452430 487 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 GTF2IP12-201ENST00000456547 356 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC109327.1-201ENST00000471666 403 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC121161.1-201ENST00000510606 652 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 SOD1P3-201ENST00000518682 454 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AP000676.2-201ENST00000529711 301 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 EIF5A2P1-201ENST00000564027 460 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC084783.1-201ENST00000565846 910 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 MIR3934-201ENST00000579806 107 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC124283.4-201ENST00000581815 456 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC008782.1-201ENST00000603386 430 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC021851.1-201ENST00000608537 1082 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 FAM27D1-201ENST00000612308 341 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC020923.1-201ENST00000624021 917 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 ZNF542P-204ENST00000482727 1305 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 MTCO1P24-201ENST00000515438 1558 ntBASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
KCNIP3Q9Y2W7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
KCNIP3Q9Y2W7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms