Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 AC097460.3-201ENST00000623099 442 ntBASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 AC073530.2-201ENST00000623987 261 ntBASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
APOBEC3BQ9UH17 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AL161912.2-201ENST00000565707 3007 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 RNU6-792P-201ENST00000363490 107 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 MTND2P15-201ENST00000418575 892 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC069157.1-201ENST00000421749 137 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC092832.1-201ENST00000422934 400 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC009965.2-201ENST00000425328 970 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 MTCO3P21-201ENST00000430791 643 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 BX119904.1-201ENST00000432026 348 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AL353093.1-201ENST00000441292 436 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 HMGB1P5-202ENST00000451497 985 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC022034.3-201ENST00000471393 478 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC012170.1-201ENST00000495139 359 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC025445.1-201ENST00000502728 300 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 RNA5SP309-201ENST00000516670 106 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC087369.1-201ENST00000520775 996 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC069240.1-201ENST00000548774 375 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 CBX3P2-202ENST00000583365 535 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 BNIP3P19-201ENST00000605397 577 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AC084824.5-201ENST00000612009 413 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 AL163051.2-201ENST00000618976 735 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 FRG1DP-201ENST00000635586 771 ntBASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
APOBEC3BQ9UH17 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
APOBEC3BQ9UH17 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
APOBEC3BQ9UH17 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.8
APOBEC3BQ9UH17 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 ZNF962P-201ENST00000443465 3140 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 MIR124-3-201ENST00000384866 87 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 MIR449B-201ENST00000384995 97 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 TAF9BP2-201ENST00000400856 499 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 RAB9AP3-201ENST00000412737 573 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AC092647.1-201ENST00000420654 287 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 NPM1P34-201ENST00000428821 893 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 RANP8-201ENST00000444720 713 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 RAB9AP1-201ENST00000449393 573 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AC015908.1-201ENST00000478739 476 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 USP9YP5-201ENST00000511770 630 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 OR4A12P-201ENST00000530847 918 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 UBTFL9-201ENST00000534504 1148 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 CR383656.14-201ENST00000551951 406 ntBASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.83□□□□□ -1.8
APOBEC3BQ9UH17 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms