Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC112230.1-201ENST00000604342 547 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AC005344.1-201ENST00000613391 459 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AL445493.3-201ENST00000619568 477 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AC020923.1-201ENST00000624021 917 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AP003072.4-201ENST00000624580 310 ntBASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CLCF1Q9UBD9 AL031985.3-201ENST00000565390 2449 ntBASIC3.46□□□□□ -1.85
CLCF1Q9UBD9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.46□□□□□ -1.85
CLCF1Q9UBD9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
CLCF1Q9UBD9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AL590704.1-201ENST00000402856 794 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 SNORA3.3-201ENST00000408712 125 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 RNA5SP39-201ENST00000411245 120 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 USP9YP19-201ENST00000412165 485 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AL390879.2-203ENST00000426943 1121 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 RPL17P35-201ENST00000432217 549 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 IFNWP4-201ENST00000453148 294 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 RPL37P3-201ENST00000456825 293 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 HNRNPKP5-201ENST00000515300 253 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AC093853.1-201ENST00000515689 483 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 SNORD116-26-201ENST00000516006 96 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 SCARNA14-201ENST00000516903 136 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 UBTFL9-201ENST00000534504 1148 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 GNRHR2P1-201ENST00000555315 631 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AC106785.3-201ENST00000564064 847 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AC079148.1-201ENST00000565944 819 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 MIR4512-201ENST00000583257 77 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 NF1P5-201ENST00000588287 448 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 AP004289.2-201ENST00000444413 1457 ntBASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLCF1Q9UBD9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 RNA5SP124-201ENST00000362739 110 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 SNORA62.3-201ENST00000365110 153 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC005189.1-201ENST00000431286 310 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AL590762.3-201ENST00000436372 640 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 Z74696.2-201ENST00000436514 498 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 RNFT1P2-201ENST00000443064 757 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 VN1R25P-201ENST00000443385 738 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 VN1R40P-201ENST00000455196 941 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 RPL31P61-201ENST00000496160 376 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC090819.1-201ENST00000523800 1111 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 OR4A12P-201ENST00000530847 918 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 MIR4429-201ENST00000580105 73 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC006946.3-201ENST00000609791 756 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AP000255.1-201ENST00000610276 676 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AL392048.1-201ENST00000613946 534 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AL121772.2-201ENST00000614331 297 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AL591424.2-201ENST00000617023 128 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 AC103858.2-201ENST00000621471 543 ntBASIC3.45□□□□□ -1.86
CLCF1Q9UBD9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms