Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC015911.5-201ENST00000587076 451 ntBASIC3.31□□□□□ -1.88
CCDC88CQ9P219 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 ASNSP1-201ENST00000518311 1939 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 RNA5SP72-201ENST00000364442 117 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AC006989.1-201ENST00000427212 131 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AL357520.1-201ENST00000441557 453 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 NPM1P39-201ENST00000449818 867 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 IGKV2D-23-201ENST00000518179 286 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AC092851.1-201ENST00000535964 478 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AC006116.10-201ENST00000591836 581 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AC005972.3-201ENST00000606304 481 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AP002967.1-201ENST00000624203 539 ntBASIC3.3□□□□□ -1.88
CCDC88CQ9P219 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC88CQ9P219 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 RNU6-55P-201ENST00000411092 107 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 RNU6-954P-201ENST00000411355 107 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC005019.1-201ENST00000436455 431 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 ANP32BP2-201ENST00000454525 545 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC135001.1-201ENST00000544546 283 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AL121766.1-201ENST00000547436 487 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AL732372.2-225ENST00000642124 456 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC090337.1-201ENST00000579651 2074 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 RN7SKP44-201ENST00000363602 316 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 RNA5SP50-201ENST00000363731 107 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 PDSS1P2-201ENST00000449397 678 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC010401.1-201ENST00000463867 348 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 CYCSP20-201ENST00000473154 315 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 RN7SKP57-201ENST00000517248 293 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC092354.2-201ENST00000607786 514 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
CCDC88CQ9P219 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC88CQ9P219 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 AC007342.7-201ENST00000624610 2337 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 ZNF833P-201ENST00000424938 1494 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 FAR1P1-201ENST00000427163 934 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 PPIAP17-201ENST00000438507 471 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 MTCO3P20-201ENST00000454926 688 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 AC037471.2-201ENST00000564941 598 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 AL592295.2-201ENST00000612578 206 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 MIR8057-201ENST00000620957 69 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 MTCO1P12-201ENST00000414273 1543 ntBASIC3.28□□□□□ -1.88
CCDC88CQ9P219 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC88CQ9P219 DDX6P1-205ENST00000441966 1436 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms