Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC8.33□□□□□ -1.08
RTN4Q9NQC3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 RNU6-715P-201ENST00000365204 103 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 HMGB3P1-201ENST00000393368 573 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 RPL24P7-201ENST00000399435 453 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 RPSAP60-201ENST00000415403 880 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC090804.1-201ENST00000448870 490 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC239798.1-201ENST00000449024 1176 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 Y_RNA.653-201ENST00000459091 95 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC106872.2-201ENST00000494303 480 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AL163153.1-201ENST00000554223 283 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC087645.1-201ENST00000588528 291 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC010463.3-201ENST00000594077 500 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AL080274.1-201ENST00000605565 220 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC104184.1-201ENST00000607513 721 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC015967.1-201ENST00000619893 476 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC022418.1-201ENST00000624118 445 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 EEF1A1P36-201ENST00000427807 1351 ntBASIC8.32□□□□□ -1.08
RTN4Q9NQC3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
RTN4Q9NQC3 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 SNORD116-29-201ENST00000384516 83 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 MIR124-3-201ENST00000384866 87 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 SNORA16.2-201ENST00000390991 127 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AL590704.1-201ENST00000402856 794 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AL391417.1-201ENST00000404100 426 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 GAS8-AS1-201ENST00000408886 435 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 OR6E1P-201ENST00000414424 923 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC004986.1-201ENST00000414855 607 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 MTND2P23-201ENST00000422990 651 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC126120.1-201ENST00000431082 470 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 GAPDHP59-201ENST00000435908 267 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC019185.1-201ENST00000442718 389 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 RN7SL515P-201ENST00000463999 297 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC005550.2-201ENST00000476382 318 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 RN7SL434P-201ENST00000495872 271 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 MRPL49P1-201ENST00000505951 535 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 SNORA31.22-201ENST00000517204 135 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 MIR5692A1-201ENST00000580523 69 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 XIAPP1-201ENST00000603162 600 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AC105254.2-201ENST00000603636 436 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AL360085.1-201ENST00000604713 532 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 AL353748.2-201ENST00000622148 471 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 MTND5P10-201ENST00000603719 1809 ntBASIC8.31□□□□□ -1.08
RTN4Q9NQC3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC8.31□□□□□ -1.08
RTN4Q9NQC3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 Y_RNA.135-201ENST00000363439 95 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 RNA5SP514-201ENST00000363717 111 ntBASIC8.3□□□□□ -1.08
RTN4Q9NQC3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC8.3□□□□□ -1.08
RTN4Q9NQC3 Y_RNA.480-201ENST00000384364 102 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms