Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC138393.1-206ENST00000540997 1886 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AC044913.1-201ENST00000557200 430 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AC145350.1-201ENST00000567426 208 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 MIR5708-201ENST00000579723 85 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AC091057.2-201ENST00000602594 792 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AL356218.2-201ENST00000605264 187 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AC007349.4-201ENST00000608114 532 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 uc_338.13-201ENST00000618243 179 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 Z73965.1-201ENST00000623412 2297 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDH9Q9HC56 AC087190.4-201ENST00000574616 8334 ntBASIC4.42□□□□□ -1.7
PCDH9Q9HC56 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 RNU1-32P-201ENST00000363937 159 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 SNORA56-201ENST00000383966 129 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 RNU6-317P-201ENST00000384031 107 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 SNORA11F-201ENST00000408237 128 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 RPL7P34-201ENST00000433316 712 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 ELOCP18-201ENST00000434209 337 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC069285.2-201ENST00000440210 275 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC009263.1-201ENST00000441193 1239 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 TPT1P13-201ENST00000449760 499 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 RPL7AP52-201ENST00000458096 790 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 RN7SL98P-201ENST00000462271 300 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC006517.1-201ENST00000480485 328 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC073522.1-201ENST00000483312 377 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC084024.2-201ENST00000503480 791 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC005351.1-201ENST00000511152 786 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 HMGB3P13-201ENST00000511263 607 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC092593.2-201ENST00000513866 913 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC124293.1-201ENST00000530034 493 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 MRPS36P5-201ENST00000551909 298 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC113403.1-201ENST00000604910 193 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AL139344.1-201ENST00000605228 195 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC016877.3-201ENST00000606778 504 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC097065.2-201ENST00000608159 533 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AP000238.1-201ENST00000608759 426 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 OR1S1-201ENST00000624470 978 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 MIR6715B-201ENST00000637172 77 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 NSRP1P1-201ENST00000444067 1693 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 AC104446.1-201ENST00000613728 1321 ntBASIC4.41□□□□□ -1.7
PCDH9Q9HC56 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH9Q9HC56 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDH9Q9HC56 AC015813.6-201ENST00000624409 5808 ntBASIC4.4□□□□□ -1.7
PCDH9Q9HC56 AC000367.1-201ENST00000452711 1766 ntBASIC4.4□□□□□ -1.7
PCDH9Q9HC56 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
PCDH9Q9HC56 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDH9Q9HC56 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH9Q9HC56 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH9Q9HC56 RNU4-92P-201ENST00000363783 136 ntBASIC4.4□□□□□ -1.71
PCDH9Q9HC56 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
PCDH9Q9HC56 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH9Q9HC56 U3.22-201ENST00000391120 215 ntBASIC4.4□□□□□ -1.71
PCDH9Q9HC56 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDH9Q9HC56 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH9Q9HC56 HMGB1P49-201ENST00000418882 569 ntBASIC4.4□□□□□ -1.71
PCDH9Q9HC56 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDH9Q9HC56 AC048351.1-201ENST00000420064 602 ntBASIC4.4□□□□□ -1.71
PCDH9Q9HC56 RPS12P5-201ENST00000423449 371 ntBASIC4.4□□□□□ -1.71
PCDH9Q9HC56 AL732292.1-201ENST00000426692 226 ntBASIC4.4□□□□□ -1.71
PCDH9Q9HC56 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDH9Q9HC56 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms