Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC110768.1-201ENST00000509222 400 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 RNU6-347P-201ENST00000516658 105 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 RANP9-201ENST00000519957 271 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 OR4V1P-201ENST00000525394 1140 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC010591.1-201ENST00000603941 649 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AL021368.1-201ENST00000607490 540 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC005021.1-201ENST00000608730 355 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC084757.4-201ENST00000616350 526 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC004825.2-201ENST00000616634 455 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC091905.1-201ENST00000624400 311 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC019080.5-201ENST00000624891 757 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 BDP1P-201ENST00000582658 1990 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 AC090337.1-201ENST00000579651 2074 ntBASIC3.96□□□□□ -1.78
NXF3Q9H4D5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NXF3Q9H4D5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AL589826.1-201ENST00000340697 249 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 RNA5SP387-201ENST00000364226 106 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 MIR218-2-201ENST00000385006 110 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AL512504.1-201ENST00000415494 778 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 HMGB3P20-201ENST00000417997 600 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 CYCSP4-201ENST00000429682 331 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 RPL21P23-201ENST00000446654 460 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 SNORD105B-201ENST00000458770 79 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC010627.1-201ENST00000503819 1294 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 ACTR6P1-201ENST00000514311 1104 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC023161.2-201ENST00000551218 780 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AL133247.2-201ENST00000603236 482 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC012468.1-201ENST00000604888 430 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC078899.5-201ENST00000612475 178 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC009032.1-201ENST00000617574 431 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC243312.2-201ENST00000623340 601 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AL392088.2-201ENST00000637607 285 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AC119674.1-212ENST00000641155 993 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 MTCO1P12-201ENST00000414273 1543 ntBASIC3.95□□□□□ -1.78
NXF3Q9H4D5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NXF3Q9H4D5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 RNU2-65P-201ENST00000410162 185 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 RNA5SP239-201ENST00000410218 129 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 DBIP2-201ENST00000419076 262 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 ATP5HP2-201ENST00000433885 485 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 AC073063.1-201ENST00000434352 607 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 PRDX3P3-201ENST00000447765 522 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 HMGB3P22-202ENST00000451823 572 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 PRSS3P4-201ENST00000453323 162 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 RPL5P13-201ENST00000462840 709 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 RPL23AP12-201ENST00000467573 473 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.94□□□□□ -1.78
NXF3Q9H4D5 AC034244.2-201ENST00000514668 858 ntBASIC3.94□□□□□ -1.78
NXF3Q9H4D5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms