Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC140479.6-201ENST00000633535 357 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 SMG1P4-204ENST00000523028 4131 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 SGO1P2-201ENST00000429458 1589 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AC007342.7-201ENST00000624610 2337 ntBASIC5.28□□□□□ -1.56
SALL3Q9BXA9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SALL3Q9BXA9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 RNU6-31P-201ENST00000384388 108 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 DNAJC19P6-201ENST00000401853 280 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 GSTM3P2-201ENST00000412746 530 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 MTCYBP5-201ENST00000423752 1135 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 RN7SL385P-201ENST00000468873 276 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC013356.1-201ENST00000489027 564 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 BNIP3P41-201ENST00000503774 571 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 OR5H4P-201ENST00000510851 923 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 RPS27AP18-201ENST00000515536 459 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 NRON-201ENST00000517270 370 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 RAB9BP1-201ENST00000519581 626 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC022880.1-201ENST00000534017 973 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 MTND6P33-201ENST00000571794 183 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 VN1R88P-201ENST00000596787 292 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC010738.1-201ENST00000604970 987 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC072039.2-201ENST00000608883 439 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AL121873.1-201ENST00000616013 524 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.27□□□□□ -1.57
SALL3Q9BXA9 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SALL3Q9BXA9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 RNU1-15P-201ENST00000353977 144 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 RNU6-549P-201ENST00000384433 107 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 Y_RNA.559-201ENST00000384686 107 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 DYNLL1P7-201ENST00000429273 258 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 RPL23AP24-201ENST00000458203 385 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC091153.1-201ENST00000466297 402 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 RPL21P6-201ENST00000479171 504 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 RN7SL810P-201ENST00000493031 276 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 MTCYBP41-201ENST00000528913 1123 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC010198.2-201ENST00000550612 259 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AGGF1P4-201ENST00000568249 801 ntBASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.26□□□□□ -1.57
SALL3Q9BXA9 AC078795.2-201ENST00000602835 1252 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms