Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 OR4K7P-201ENST00000580232 945 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC012065.4-201ENST00000602445 679 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC005084.1-201ENST00000605160 304 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AP005432.2-201ENST00000608162 586 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AL354760.1-201ENST00000608357 643 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC135507.2-201ENST00000612443 309 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 MIR7844-201ENST00000616161 122 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AP001005.3-201ENST00000622049 129 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AL353662.3-201ENST00000625131 237 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 AC104260.2-201ENST00000623551 3497 ntBASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP1Q96SZ6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 TRIM51GP-201ENST00000534741 1350 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 INTS6P1-201ENST00000504674 2530 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 MAPK10-263ENST00000641052 4307 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6-374P-201ENST00000364146 108 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 RNA5SP455-201ENST00000365190 119 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 Y_RNA.450-201ENST00000384198 113 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6-1263P-201ENST00000384601 106 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 MIR181A1-201ENST00000385026 110 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 GLRXP1-201ENST00000423261 334 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 OR5AW1P-201ENST00000426334 1006 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC079776.3-201ENST00000450665 370 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC013267.1-201ENST00000458227 267 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 RPS4XP12-201ENST00000461747 709 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 RN7SL826P-201ENST00000479724 288 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 NDUFA5P12-201ENST00000503796 343 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC073358.1-201ENST00000505671 684 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 OR5AK1P-201ENST00000524837 922 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AP001922.4-201ENST00000526967 290 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 OR5D15P-201ENST00000531671 942 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 CR383656.6-201ENST00000550518 394 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 BNIP3P26-201ENST00000600827 554 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 SEPT7P9-203ENST00000604116 343 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AL390816.3-201ENST00000604527 1066 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AL049634.3-201ENST00000604968 457 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC012360.2-201ENST00000609349 391 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AC005539.1-201ENST00000443768 1479 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 Z95331.1-201ENST00000623075 23112 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDK5RAP1Q96SZ6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP1Q96SZ6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms