Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC42Q96M95 FRG1CP-201ENST00000358464 769 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 AL034403.1-201ENST00000399414 885 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 SKINT1L-201ENST00000401057 817 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 PPIAP31-201ENST00000405422 495 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 RPA2P2-201ENST00000419698 796 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 AC048351.1-201ENST00000420064 602 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 FAR2P4-202ENST00000425399 584 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 TRGV7-201ENST00000427089 353 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 RPS27AP12-201ENST00000429552 465 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 AC114982.2-201ENST00000461396 358 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 RN7SL132P-201ENST00000478131 296 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 AC021205.2-201ENST00000480069 347 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 AC005912.1-201ENST00000495392 255 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC42Q96M95 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 AC087888.1-201ENST00000550884 1254 ntBASIC3.75□□□□□ -1.81
CCDC42Q96M95 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC42Q96M95 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC42Q96M95 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC42Q96M95 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC42Q96M95 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC42Q96M95 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 ZNF542P-204ENST00000482727 1305 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC42Q96M95 SNORA56-201ENST00000383966 129 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 RNA5SP31-201ENST00000411144 127 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC093578.1-201ENST00000415219 368 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AL807761.1-201ENST00000417622 171 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 RPS12P23-201ENST00000419579 400 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 FAR1P1-201ENST00000427163 934 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 RPL23AP82-202ENST00000427528 469 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC010468.1-201ENST00000461022 817 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 CENPBD1P1-201ENST00000464061 469 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC018635.1-201ENST00000468292 1030 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 RN7SL442P-201ENST00000473804 320 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 LARP7P4-201ENST00000481075 878 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC011492.1-201ENST00000600023 315 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AL049844.2-201ENST00000604280 628 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC010857.1-201ENST00000606398 594 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC090912.3-201ENST00000609775 533 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AL450489.1-201ENST00000612071 468 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 ZYXP1-201ENST00000617638 118 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC145207.9-201ENST00000623802 325 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC42Q96M95 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC007496.3-201ENST00000624987 3443 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 MFSD8-233ENST00000641482 4860 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC42Q96M95 AC000367.1-201ENST00000452711 1766 ntBASIC3.74□□□□□ -1.81
CCDC42Q96M95 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC42Q96M95 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC42Q96M95 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC42Q96M95 RAD1P1-201ENST00000231383 813 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CCDC42Q96M95 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC42Q96M95 RPL31P52-201ENST00000407532 367 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 RNA5SP107-201ENST00000411358 122 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC42Q96M95 GLRXP1-201ENST00000423261 334 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC093716.1-201ENST00000435923 377 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC010683.1-201ENST00000473673 378 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC093331.1-201ENST00000521474 169 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC007991.1-201ENST00000522680 631 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 HIGD1AP10-201ENST00000527837 282 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CCDC42Q96M95 OR8R1P-201ENST00000543943 764 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC025260.1-201ENST00000548858 430 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC004024.1-201ENST00000549244 247 ntBASIC3.73□□□□□ -1.81
CCDC42Q96M95 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms