Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP47Q96K76 NCAPGP2-201ENST00000557911 754 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.81□□□□□ -1.64
USP47Q96K76 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.81□□□□□ -1.64
USP47Q96K76 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP47Q96K76 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP47Q96K76 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP47Q96K76 DDX6P1-205ENST00000441966 1436 ntBASIC4.8□□□□□ -1.64
USP47Q96K76 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.8□□□□□ -1.64
USP47Q96K76 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.8□□□□□ -1.64
USP47Q96K76 AC005326.1-201ENST00000429197 123 ntBASIC4.8□□□□□ -1.64
USP47Q96K76 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.8□□□□□ -1.64
USP47Q96K76 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.8□□□□□ -1.64
USP47Q96K76 AL591363.1-201ENST00000450091 483 ntBASIC4.8□□□□□ -1.64
USP47Q96K76 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.8□□□□□ -1.64
USP47Q96K76 MIR2114-201ENST00000516645 80 ntBASIC4.8□□□□□ -1.64
USP47Q96K76 AL121839.1-201ENST00000556233 1185 ntBASIC4.8□□□□□ -1.64
USP47Q96K76 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.8□□□□□ -1.64
USP47Q96K76 AC106785.3-201ENST00000564064 847 ntBASIC4.8□□□□□ -1.64
USP47Q96K76 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.8□□□□□ -1.64
USP47Q96K76 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.8□□□□□ -1.64
USP47Q96K76 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.8□□□□□ -1.64
USP47Q96K76 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.8□□□□□ -1.64
USP47Q96K76 MIMT1-201ENST00000597105 1050 ntBASIC4.8□□□□□ -1.64
USP47Q96K76 AL513477.2-201ENST00000607858 568 ntBASIC4.8□□□□□ -1.64
USP47Q96K76 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
USP47Q96K76 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.8□□□□□ -1.64
USP47Q96K76 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
USP47Q96K76 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP47Q96K76 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP47Q96K76 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
USP47Q96K76 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 HMGB3P18-201ENST00000406327 590 ntBASIC4.79□□□□□ -1.64
USP47Q96K76 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.79□□□□□ -1.64
USP47Q96K76 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.79□□□□□ -1.64
USP47Q96K76 RAB9AP5-201ENST00000437794 597 ntBASIC4.79□□□□□ -1.64
USP47Q96K76 RAB9AP2-201ENST00000443911 597 ntBASIC4.79□□□□□ -1.64
USP47Q96K76 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.79□□□□□ -1.64
USP47Q96K76 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.79□□□□□ -1.64
USP47Q96K76 AC112198.1-201ENST00000505369 1220 ntBASIC4.79□□□□□ -1.64
USP47Q96K76 MIR5186-201ENST00000577504 120 ntBASIC4.79□□□□□ -1.64
USP47Q96K76 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.79□□□□□ -1.64
USP47Q96K76 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
USP47Q96K76 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 AC123912.3-201ENST00000600907 1367 ntBASIC4.79□□□□□ -1.64
USP47Q96K76 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
USP47Q96K76 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
USP47Q96K76 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP47Q96K76 BX323014.1-201ENST00000412876 237 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP47Q96K76 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.78□□□□□ -1.64
USP47Q96K76 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP47Q96K76 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP47Q96K76 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP47Q96K76 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.78□□□□□ -1.64
USP47Q96K76 AL358913.1-201ENST00000554342 121 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 AL137246.1-201ENST00000607072 977 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 SCARNA15.3-201ENST00000626315 122 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 SCARNA4.1-201ENST00000628597 123 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.78□□□□□ -1.64
USP47Q96K76 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.78□□□□□ -1.64
USP47Q96K76 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USP47Q96K76 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
USP47Q96K76 AC106901.1-201ENST00000425086 698 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 AC017083.1-201ENST00000428093 483 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 AC005019.1-201ENST00000436455 431 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.78□□□□□ -1.64
USP47Q96K76 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.78□□□□□ -1.64
USP47Q96K76 FCF1P8-201ENST00000510322 597 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 AP000859.1-201ENST00000525536 307 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.78□□□□□ -1.64
USP47Q96K76 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.78□□□□□ -1.64
USP47Q96K76 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.78□□□□□ -1.64
USP47Q96K76 MIR8057-201ENST00000620957 69 ntBASIC4.78□□□□□ -1.64
USP47Q96K76 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.78□□□□□ -1.64
USP47Q96K76 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP47Q96K76 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP47Q96K76 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP47Q96K76 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP47Q96K76 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USP47Q96K76 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
USP47Q96K76 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
USP47Q96K76 SNORA79B-201ENST00000410557 148 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 BX842559.1-201ENST00000419615 532 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 RPL23AP82-202ENST00000427528 469 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 AC005300.1-201ENST00000428401 373 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 CENPBD1P1-201ENST00000464061 469 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.77□□□□□ -1.65
USP47Q96K76 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.77□□□□□ -1.65
USP47Q96K76 RN7SKP34-201ENST00000516142 244 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 RNU4-18P-201ENST00000516751 149 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms