Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL138820.1-201ENST00000617901 5305 ntBASIC5.7□□□□□ -1.5
DDX1Q92499 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.7□□□□□ -1.5
DDX1Q92499 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.7□□□□□ -1.5
DDX1Q92499 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
DDX1Q92499 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
DDX1Q92499 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
DDX1Q92499 RNU6-348P-201ENST00000384386 107 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 RPL17P50-201ENST00000396131 546 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
DDX1Q92499 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 RPL21P108-201ENST00000413857 481 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC008280.1-201ENST00000418851 412 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 UBTFL3-201ENST00000418934 1024 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX1Q92499 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX1Q92499 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 NANOGNBP1-201ENST00000448444 480 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 RPL36AP33-201ENST00000450395 310 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 SLC31A1P1-201ENST00000451221 567 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX1Q92499 RPL18AP17-201ENST00000455326 198 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 AC108078.3-201ENST00000502633 489 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX1Q92499 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 OR11J2P-201ENST00000555298 907 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 MTCYBP13-201ENST00000578634 1093 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX1Q92499 AP002799.1-201ENST00000623552 423 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 AC079228.1-201ENST00000624774 1049 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 AP005264.7-201ENST00000625003 745 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.69□□□□□ -1.5
DDX1Q92499 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.69□□□□□ -1.5
DDX1Q92499 OR5H6-203ENST00000642105 978 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 AC009229.4-201ENST00000623854 1947 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 AC097063.1-201ENST00000426714 1797 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 AC027228.2-201ENST00000567141 2154 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.69□□□□□ -1.5
DDX1Q92499 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DDX1Q92499 XPOTP1-201ENST00000443317 2398 ntBASIC5.69□□□□□ -1.5
DDX1Q92499 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
DDX1Q92499 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
DDX1Q92499 OR9G4-201ENST00000302957 984 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 OR1L6-202ENST00000373684 1044 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.68□□□□□ -1.5
DDX1Q92499 RNU6-1042P-201ENST00000384204 107 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC073264.1-201ENST00000411508 416 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC009302.1-201ENST00000417147 390 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.68□□□□□ -1.5
DDX1Q92499 AC093698.1-201ENST00000423843 571 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.68□□□□□ -1.5
DDX1Q92499 TMX2P1-201ENST00000436507 708 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 PAXBP1P1-201ENST00000449315 447 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.68□□□□□ -1.5
DDX1Q92499 AC009963.2-201ENST00000453431 138 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 SSXP1-201ENST00000453640 473 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC010301.1-201ENST00000473936 355 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 RPS4XP1-201ENST00000482189 787 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 RPS24P16-201ENST00000497294 392 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC090071.1-201ENST00000507713 644 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC098976.1-201ENST00000513014 541 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.68□□□□□ -1.5
DDX1Q92499 RNU6-583P-201ENST00000516012 92 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 SNORA20.3-201ENST00000516880 132 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 RN7SKP99-201ENST00000517028 307 ntBASIC5.68□□□□□ -1.5
DDX1Q92499 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms