Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 IPMKP1-201ENST00000425988 855 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 ATP5C1P1-201ENST00000441945 895 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 U3.44-201ENST00000458938 192 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC026784.1-201ENST00000507986 352 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC135001.1-201ENST00000544546 283 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC020914.4-201ENST00000597690 277 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 CKS1BP3-201ENST00000600888 237 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC022960.2-201ENST00000616300 666 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AL669942.2-201ENST00000620352 697 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC108206.1-201ENST00000570186 4159 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 RNU1-15P-201ENST00000353977 144 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 OR1AA1P-201ENST00000419597 916 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 RPL7P59-201ENST00000447700 943 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 NPM1P17-201ENST00000479221 602 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC011503.2-201ENST00000594230 1500 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 RNU1-140P-201ENST00000365040 165 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AL139281.1-201ENST00000422120 335 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 KCTD9P3-201ENST00000434597 1169 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC105918.1-201ENST00000474399 838 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC008489.1-201ENST00000524271 483 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC023161.2-201ENST00000551218 780 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 AL133247.2-201ENST00000603236 482 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 U7.8-201ENST00000619968 63 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 OR5AC4P-202ENST00000642086 985 ntBASIC2.35□□□□□ -2.03
ALMS1Q8TCU4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 AC010300.1-201ENST00000600671 5134 ntBASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 RPL30P2-201ENST00000414021 291 ntBASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 RPS15AP29-201ENST00000445539 400 ntBASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 AC090877.1-201ENST00000561418 344 ntBASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 AL109933.2-201ENST00000452651 260 ntBASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 RPL21P71-201ENST00000465598 459 ntBASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 AC112184.1-201ENST00000505179 312 ntBASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
ALMS1Q8TCU4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 OR5J1P-201ENST00000313544 939 ntBASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 AC006028.1-201ENST00000438379 402 ntBASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 RPS29P31-201ENST00000446147 164 ntBASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 AC103783.1-201ENST00000520506 373 ntBASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 AC026333.2-201ENST00000542164 106 ntBASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 AL137072.1-201ENST00000603444 466 ntBASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 AL591424.2-201ENST00000617023 128 ntBASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 AL590240.3-201ENST00000621416 943 ntBASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
ALMS1Q8TCU4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 AC134882.1-201ENST00000603738 1676 ntBASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 RNU4-82P-201ENST00000362443 140 ntBASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.33□□□□□ -2.04
ALMS1Q8TCU4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms