Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RN7SL284P-201ENST00000498823 275 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC060775.1-201ENST00000518241 520 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC105029.1-201ENST00000520250 669 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AL109766.1-201ENST00000555080 552 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC090515.3-201ENST00000560431 315 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC037471.2-201ENST00000564941 598 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC034105.3-201ENST00000565294 442 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC055876.1-202ENST00000567053 138 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC092121.1-201ENST00000569452 202 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 MIR5186-201ENST00000577504 120 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC017100.2-201ENST00000584628 355 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 COX6CP4-201ENST00000605798 228 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC015712.7-201ENST00000615211 635 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC009237.17-201ENST00000618111 748 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC090527.3-201ENST00000619041 548 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC138649.5-201ENST00000637456 137 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AC108467.2-201ENST00000617640 1597 ntBASIC5.32□□□□□ -1.56
NUP43Q8NFH3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
NUP43Q8NFH3 AP002907.1-201ENST00000606361 1430 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AL121886.1-201ENST00000358609 435 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 Y_RNA.157-201ENST00000363638 102 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC005042.1-201ENST00000393397 800 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC068050.1-201ENST00000394891 380 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RPL23AP32-201ENST00000395315 459 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 DHFRP6-201ENST00000401776 268 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC211486.3-201ENST00000412694 621 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AL354868.1-201ENST00000417077 482 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RNF10P1-201ENST00000418589 369 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC104837.2-201ENST00000427236 424 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 ACTR3P2-201ENST00000439585 1257 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 NIPA2P5-201ENST00000452282 464 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 MRE11P1-201ENST00000464884 2127 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RPL31P50-201ENST00000471002 296 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC002456.2-201ENST00000509356 380 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 Vault.3-201ENST00000516676 95 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 RNU6-201P-201ENST00000517100 61 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC022616.6-201ENST00000520479 119 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 PHBP17-201ENST00000528576 541 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AC008127.2-201ENST00000549925 1075 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 HSPE1P2-201ENST00000554777 306 ntBASIC5.31□□□□□ -1.56
NUP43Q8NFH3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms