Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 RNA5SP36-201ENST00000410197 133 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AL359265.2-201ENST00000434367 631 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 RPL23AP52-201ENST00000439311 478 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC092170.1-201ENST00000440211 356 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC004865.1-201ENST00000442276 1003 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 CEACAMP6-201ENST00000452007 574 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 RPS3AP41-201ENST00000462701 778 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 RPS4XP14-201ENST00000493072 781 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC141257.3-201ENST00000572906 215 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC115286.1-201ENST00000604298 434 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 RNA5SP108-201ENST00000605921 117 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC012409.3-201ENST00000611343 981 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 FAM27D1-201ENST00000612308 341 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 MIR8058-201ENST00000615737 89 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC121761.2-201ENST00000617300 689 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC243756.2-201ENST00000618406 463 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC017104.5-201ENST00000637647 639 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 LINC00561-201ENST00000565815 2738 ntBASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71LQ8N9Z2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 RPL22P22-201ENST00000395439 379 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AP002784.2-201ENST00000397300 549 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 RN7SKP235-201ENST00000410662 305 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC009237.5-201ENST00000414271 501 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC016769.2-201ENST00000414815 475 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 DEFB130D-201ENST00000426866 237 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 USP9YP31-201ENST00000431405 881 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 KCTD9P3-201ENST00000434597 1169 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL645931.1-201ENST00000439737 410 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 ARL2BPP10-201ENST00000446487 531 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 RPS3AP53-201ENST00000454716 778 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 RN7SL177P-201ENST00000476596 299 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC090071.1-201ENST00000507713 644 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC005921.1-201ENST00000510589 286 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC104115.2-201ENST00000523026 687 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC019227.1-201ENST00000526902 510 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AP001922.4-201ENST00000526967 290 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 HIGD1AP10-201ENST00000527837 282 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 BRD9P1-201ENST00000529855 560 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC105233.3-201ENST00000531125 744 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC084783.1-201ENST00000565846 910 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AC023824.3-201ENST00000569003 562 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 BNIP3P27-201ENST00000599991 412 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL592436.1-201ENST00000605135 558 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL138955.1-201ENST00000622881 1040 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 NMD3P1-201ENST00000439704 1488 ntBASIC3.38□□□□□ -1.87
CCDC71LQ8N9Z2 AL132640.2-201ENST00000559968 1698 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms