Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 PPIAP23-201ENST00000420099 497 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC134879.1-201ENST00000426062 394 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 HMGB3P11-201ENST00000440127 604 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RPL10P17-201ENST00000453852 316 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 BX323845.2-201ENST00000458382 234 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RN7SL306P-201ENST00000492941 296 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RN7SL775P-201ENST00000498361 336 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 CCDC34P1-201ENST00000507441 517 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RPL7L1P7-201ENST00000509986 724 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 SMURF2P1-201ENST00000514992 481 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-798P-201ENST00000516912 103 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC090136.1-201ENST00000520009 240 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 FAM60DP-201ENST00000524174 632 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AL049779.2-201ENST00000553847 315 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 DNAJC8P1-201ENST00000554535 372 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC100830.2-201ENST00000581636 240 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 MIR4470-201ENST00000583453 72 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC007566.2-201ENST00000603642 413 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC007823.1-201ENST00000569932 1566 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AL442639.1-201ENST00000625030 1899 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 OR55B1P-203ENST00000641518 2602 ntBASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DEPDC4Q8N2C3 AC103710.2-202ENST00000641454 2853 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AL031119.1-201ENST00000404707 1879 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RN7SKP184-201ENST00000362348 333 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-960P-201ENST00000364056 120 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RNU6-1078P-201ENST00000364522 103 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 SNORD51-201ENST00000384320 80 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RNA5SP53-201ENST00000391299 120 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 MRPL32P1-201ENST00000406301 247 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 MICG-208ENST00000416822 132 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RPL32P28-201ENST00000443577 397 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 CYCSP44-201ENST00000448560 313 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RPS17P13-201ENST00000448974 407 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC010733.1-201ENST00000451515 401 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 YRDCP3-201ENST00000456507 480 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RNA5SP454-201ENST00000517231 127 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC091932.1-201ENST00000569381 427 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC004232.1-201ENST00000571388 208 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 MIR4790-201ENST00000577799 79 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 MIR378H-201ENST00000579966 83 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC024619.4-201ENST00000580924 316 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC025588.3-201ENST00000604182 274 ntBASIC6.24□□□□□ -1.41
DEPDC4Q8N2C3 AC113194.1-201ENST00000606037 500 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms