Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AL034418.1-201ENST00000448675 860 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC053481.1-201ENST00000467217 306 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 MTCO3P35-201ENST00000485582 781 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC084024.2-201ENST00000503480 791 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 BOLA3P3-201ENST00000505182 232 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 MTND4LP31-201ENST00000514859 294 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 RN7SKP82-201ENST00000516786 223 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 MTND4P33-201ENST00000556706 766 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 MIR4444-1-201ENST00000581696 74 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 MIR4444-2-201ENST00000584390 74 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC008687.2-201ENST00000597865 520 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AL390838.2-201ENST00000602394 274 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC113368.1-201ENST00000603736 382 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC069545.1-201ENST00000605671 358 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC024257.5-201ENST00000612739 531 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC022509.4-201ENST00000621404 572 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 AC006963.1-201ENST00000624003 1052 ntBASIC4.89□□□□□ -1.63
HERC6Q8IVU3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HERC6Q8IVU3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 MIR372-201ENST00000362225 67 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 RNA5SP391-201ENST00000363456 119 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 SNORA62.3-201ENST00000365110 153 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 RNU6-444P-201ENST00000383988 108 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AL121978.1-201ENST00000402778 359 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 XKRYP1-201ENST00000423438 492 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 XKRYP2-201ENST00000432915 492 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 SEPT7P5-201ENST00000434048 306 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC079776.3-201ENST00000450665 370 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC112206.1-201ENST00000468416 477 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 RN7SL132P-201ENST00000478131 296 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC011352.3-201ENST00000505162 593 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 RNU6-202P-201ENST00000515998 96 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 SNORD116-26-201ENST00000516006 96 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 TRAV8-5-201ENST00000537369 341 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC068446.3-201ENST00000555285 382 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC093519.1-201ENST00000566109 298 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 CYCSP40-201ENST00000575927 294 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC113403.1-201ENST00000604910 193 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC020634.1-201ENST00000608701 549 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC008147.4-201ENST00000617570 1204 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC006386.1-201ENST00000619436 415 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AC006065.6-201ENST00000625201 545 ntBASIC4.88□□□□□ -1.63
HERC6Q8IVU3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HERC6Q8IVU3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HERC6Q8IVU3 AC107081.3-201ENST00000612715 2034 ntBASIC4.87□□□□□ -1.63
HERC6Q8IVU3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms