Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC010738.1-201ENST00000604970 987 ntBASIC4.19□□□□□ -1.74
SHFQ7M4L6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.19□□□□□ -1.74
SHFQ7M4L6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHFQ7M4L6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.19□□□□□ -1.74
SHFQ7M4L6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.19□□□□□ -1.74
SHFQ7M4L6 AC122133.1-201ENST00000613964 233 ntBASIC4.19□□□□□ -1.74
SHFQ7M4L6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SHFQ7M4L6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.19□□□□□ -1.74
SHFQ7M4L6 AL590763.1-201ENST00000398297 1545 ntBASIC4.19□□□□□ -1.74
SHFQ7M4L6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHFQ7M4L6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SHFQ7M4L6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.19□□□□□ -1.74
SHFQ7M4L6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 MTND4P34-201ENST00000572715 1371 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL078604.1-201ENST00000404609 466 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 RBMY2KP-201ENST00000418221 992 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC093162.1-201ENST00000419682 124 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 MTCO3P1-205ENST00000422088 832 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 RPS26P47-201ENST00000427219 348 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 RPL31P54-201ENST00000429803 370 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL121877.1-201ENST00000453704 622 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC079168.2-201ENST00000453977 416 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 RPS5P7-201ENST00000456664 608 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 BX284632.1-201ENST00000478218 541 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 RN7SL809P-201ENST00000482040 297 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 GAPDHP56-201ENST00000506031 988 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 RNA5SP446-201ENST00000515955 82 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 IGLV3-26-201ENST00000520756 302 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 EIF5A2P1-201ENST00000564027 460 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL163642.2-201ENST00000604722 1019 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC112220.3-201ENST00000605502 502 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC004223.4-201ENST00000612426 332 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC022467.1-201ENST00000614738 749 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AL121873.1-201ENST00000616013 524 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC131238.1-201ENST00000617135 328 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.18□□□□□ -1.74
SHFQ7M4L6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHFQ7M4L6 NCLP2-201ENST00000416078 1462 ntBASIC4.18□□□□□ -1.74
SHFQ7M4L6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
SHFQ7M4L6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHFQ7M4L6 AC087190.4-201ENST00000574616 8334 ntBASIC4.17□□□□□ -1.74
SHFQ7M4L6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHFQ7M4L6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHFQ7M4L6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SHFQ7M4L6 RNU6-251P-201ENST00000363235 104 ntBASIC4.17□□□□□ -1.74
SHFQ7M4L6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.17□□□□□ -1.74
SHFQ7M4L6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.17□□□□□ -1.74
SHFQ7M4L6 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.17□□□□□ -1.74
SHFQ7M4L6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.17□□□□□ -1.74
SHFQ7M4L6 AC008280.1-201ENST00000418851 412 ntBASIC4.17□□□□□ -1.74
SHFQ7M4L6 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.17□□□□□ -1.74
SHFQ7M4L6 AL031736.2-201ENST00000426573 787 ntBASIC4.17□□□□□ -1.74
SHFQ7M4L6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.17□□□□□ -1.74
SHFQ7M4L6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms