Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
FOXR1Q6PIV2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 CDC27P3-201ENST00000635418 1910 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 RNA5SP433-201ENST00000364491 114 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 RNU6-996P-201ENST00000365438 107 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 RNU6-657P-201ENST00000383904 107 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 MIR514A2-201ENST00000385131 88 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 MIR514A3-201ENST00000385132 88 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 UQCRBP1-201ENST00000421129 336 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 CYCSP52-201ENST00000422857 310 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC079922.1-201ENST00000443291 359 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 OR13K1P-201ENST00000444577 975 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 RPL21P23-201ENST00000446654 460 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 HIGD1AP8-201ENST00000453927 274 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC110794.1-201ENST00000505816 425 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 RNU6-789P-201ENST00000517105 102 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC093519.1-201ENST00000566109 298 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 SNORD96A-201ENST00000606577 79 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AL589743.6-201ENST00000611025 117 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC026634.1-201ENST00000634369 198 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 AC089998.1-201ENST00000548575 3141 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 SMG1P5-202ENST00000529428 4219 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 SMG1P2-201ENST00000566127 4221 ntBASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.45□□□□□ -1.38
FOXR1Q6PIV2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 MTND5P10-201ENST00000603719 1809 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 RNA5SP321-201ENST00000362722 111 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 Y_RNA.153-201ENST00000363615 91 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 U3.10-201ENST00000364459 214 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 Y_RNA.512-201ENST00000384518 102 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC009965.2-201ENST00000425328 970 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 SNRPEP7-201ENST00000438350 220 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 HMGB1P12-201ENST00000438594 598 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 H2AFZP6-201ENST00000444403 394 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 GAPDHP23-201ENST00000444823 993 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 HMGN1P2-201ENST00000445197 310 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 ELOCP24-201ENST00000456370 334 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 SNX18P26-201ENST00000458433 740 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AC015724.1-201ENST00000478577 156 ntBASIC6.44□□□□□ -1.38
FOXR1Q6PIV2 AL035404.1-201ENST00000497982 568 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms