Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MAPK10-263ENST00000641052 4307 ntBASIC4.44□□□□□ -1.7
ZNF549Q6P9A3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
ZNF549Q6P9A3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
ZNF549Q6P9A3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC138393.1-206ENST00000540997 1886 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RNU6-560P-201ENST00000364007 108 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RNU6-707P-201ENST00000364647 95 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RNU6-1200P-201ENST00000384162 107 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 Y_RNA.553-201ENST00000384670 102 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 MIR142-201ENST00000384835 87 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 MT-TP-201ENST00000387461 68 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC093719.1-202ENST00000392735 373 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC062016.2-201ENST00000420950 676 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 OR5AW1P-201ENST00000426334 1006 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RPEP2-201ENST00000432149 701 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC093716.1-201ENST00000435923 377 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC092170.1-201ENST00000440211 356 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 MTND3P1-201ENST00000441336 220 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RPL23AP76-201ENST00000441860 458 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 MTCO1P19-201ENST00000443487 500 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 CALM1P2-201ENST00000452941 448 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RPL21P134-201ENST00000453468 483 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RPL21P6-201ENST00000479171 504 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC012158.1-204ENST00000483430 465 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC008897.1-201ENST00000494006 347 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC092045.1-201ENST00000495716 1231 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC060788.1-201ENST00000521318 469 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AP000619.3-201ENST00000535634 1127 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AL358913.1-201ENST00000554342 121 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 MIR4270-201ENST00000581799 70 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 VN1R88P-201ENST00000596787 292 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC073544.2-201ENST00000601155 540 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AF131215.7-201ENST00000602443 707 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC239868.4-201ENST00000608318 671 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 VN1R74P-201ENST00000613259 503 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC009509.4-201ENST00000619202 509 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 AC099842.1-201ENST00000619919 596 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 RLIMP2-201ENST00000427891 1563 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 ZNF833P-201ENST00000424938 1494 ntBASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZNF549Q6P9A3 MTND5P24-201ENST00000438892 1767 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AP005901.5-201ENST00000545779 1796 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 RN7SKP103-201ENST00000363848 320 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 RNVU1-6-201ENST00000364688 164 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 OR1L1-202ENST00000373686 1083 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 RNU1-44P-201ENST00000384453 163 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 Y_RNA.560-201ENST00000384689 102 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms