Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RNF43Q68DV7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC004158.1-201ENST00000564508 4319 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 RNU6-244P-201ENST00000391028 104 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 AL162578.1-201ENST00000406202 378 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 RNU6-373P-201ENST00000411247 98 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AP000534.2-201ENST00000412729 568 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AL139128.1-201ENST00000413921 941 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 SPA17P1-201ENST00000416656 452 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 MTCYBP8-201ENST00000422855 651 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 HSPE1P16-201ENST00000426640 348 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC138761.5-201ENST00000433967 325 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC002504.1-201ENST00000438281 691 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 PTMAP6-201ENST00000439110 327 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 RPL38P3-201ENST00000484463 213 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC112206.3-201ENST00000514578 389 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 Y_RNA.672-201ENST00000516289 104 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC027026.1-201ENST00000532323 742 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC013828.2-201ENST00000532487 235 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 MIR4505-201ENST00000582238 73 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AL512605.2-201ENST00000592972 256 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC006115.2-201ENST00000596823 202 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC009248.2-201ENST00000619826 254 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 AC005618.4-201ENST00000625053 554 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 CKAP2P1-201ENST00000555477 2049 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 AL161912.4-201ENST00000623889 2468 ntBASIC6.04□□□□□ -1.44
RNF43Q68DV7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RNF43Q68DV7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RNF43Q68DV7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RNF43Q68DV7 C4BPAP1-201ENST00000415474 1893 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 Y_RNA.184-201ENST00000363884 108 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 Y_RNA.259-201ENST00000364619 101 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 RN7SKP186-201ENST00000365371 303 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AL356967.1-201ENST00000406305 431 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 Y_RNA.625-201ENST00000411256 107 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 DPPA2P3-201ENST00000411853 655 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC245054.2-201ENST00000415639 319 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC113618.1-201ENST00000416747 285 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC083875.1-201ENST00000419509 405 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC133104.1-201ENST00000429100 218 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AL513175.1-201ENST00000431492 780 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 FTH1P16-201ENST00000435241 552 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 GTF2IP13-201ENST00000438487 386 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 ARL2BPP10-201ENST00000446487 531 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 NDUFA5P7-201ENST00000452914 242 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 RPL18AP17-201ENST00000455326 198 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC099563.1-201ENST00000456086 418 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 MTCO2P29-201ENST00000465212 189 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AL133445.1-201ENST00000467051 452 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC108693.1-201ENST00000496068 432 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 BTG4P1-201ENST00000510421 183 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC017037.2-201ENST00000513850 890 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 BX510359.5-201ENST00000515651 304 ntBASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.03□□□□□ -1.44
RNF43Q68DV7 AC018630.1-201ENST00000541376 925 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms