Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 BX119904.1-201ENST00000432026 348 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC099563.1-201ENST00000456086 418 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AL512310.1-201ENST00000548639 172 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 AC097505.1-201ENST00000610199 565 ntBASIC3.27□□□□□ -1.89
RIF1Q5UIP0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RIF1Q5UIP0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 SMC4P1-201ENST00000414479 527 ntBASIC3.26□□□□□ -1.89
RIF1Q5UIP0 RPL6P21-201ENST00000418672 846 ntBASIC3.26□□□□□ -1.89
RIF1Q5UIP0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AL603825.1-201ENST00000438481 80 ntBASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AC023161.2-201ENST00000551218 780 ntBASIC3.26□□□□□ -1.89
RIF1Q5UIP0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AL031584.1-201ENST00000447169 754 ntBASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.26□□□□□ -1.89
RIF1Q5UIP0 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.26□□□□□ -1.89
RIF1Q5UIP0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 VN1R40P-201ENST00000455196 941 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 RNA5SP367-201ENST00000516557 118 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 MIR2682-201ENST00000580305 110 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 ELF2P3-201ENST00000445099 1506 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 OR13C3-201ENST00000374781 1108 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AL357552.1-201ENST00000445254 415 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 snoU13.15-201ENST00000459407 104 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AC105227.2-201ENST00000615075 605 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 AL512643.1-201ENST00000635735 524 ntBASIC3.25□□□□□ -1.89
RIF1Q5UIP0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RIF1Q5UIP0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 RSL24D1P1-201ENST00000404972 493 ntBASIC3.24□□□□□ -1.89
RIF1Q5UIP0 RAP1BP1-201ENST00000412709 553 ntBASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AC023598.1-201ENST00000472521 361 ntBASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AC008413.1-201ENST00000511864 177 ntBASIC3.24□□□□□ -1.89
RIF1Q5UIP0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 TRAV15-201ENST00000556680 249 ntBASIC3.24□□□□□ -1.89
RIF1Q5UIP0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AC000374.1-201ENST00000434698 1745 ntBASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 MYL8P-204ENST00000431574 518 ntBASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 AL162713.1-201ENST00000604480 262 ntBASIC3.24□□□□□ -1.89
RIF1Q5UIP0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RIF1Q5UIP0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RIF1Q5UIP0 MAPK10-373ENST00000641983 6772 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms