Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC004943.3-201ENST00000624116 600 ntBASIC4.48□□□□□ -1.69
RUNDC3AQ59EK9 AC007671.2-201ENST00000637344 619 ntBASIC4.48□□□□□ -1.69
RUNDC3AQ59EK9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RUNDC3AQ59EK9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RUNDC3AQ59EK9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.48□□□□□ -1.69
RUNDC3AQ59EK9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RUNDC3AQ59EK9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
RUNDC3AQ59EK9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 RN7SKP104-201ENST00000362605 328 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 RNU1-85P-201ENST00000364127 164 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 MIR649-201ENST00000384843 97 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 ATP5F1P4-201ENST00000397288 746 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 ZNF603P-201ENST00000405613 487 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 RNU2-28P-201ENST00000410457 189 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 GJA6P-201ENST00000415117 1042 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC073136.2-201ENST00000417282 849 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AL365203.2-201ENST00000423444 196 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AL022400.1-201ENST00000423946 935 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 RPL7P11-201ENST00000437586 658 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 PRPF38AP2-201ENST00000438179 851 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 MTND2P20-201ENST00000440805 661 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 MTCO1P48-201ENST00000448024 1096 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 RN7SL214P-201ENST00000487317 265 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 LINC00888-204ENST00000487386 421 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC008953.1-201ENST00000497334 318 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 KLRA1P-201ENST00000503499 986 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 MTCYBP37-201ENST00000510642 1133 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 HNRNPKP5-201ENST00000515300 253 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 Y_RNA.688-201ENST00000516565 95 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC091515.1-201ENST00000548110 679 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC109446.2-201ENST00000567872 497 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC135628.1-201ENST00000568867 534 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 RN7SL802P-201ENST00000577858 299 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC010857.1-201ENST00000606398 594 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AP001521.2-201ENST00000608772 546 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC116651.1-201ENST00000609724 556 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC093799.2-201ENST00000610062 578 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC005962.2-201ENST00000611427 652 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AL392048.1-201ENST00000613946 534 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC079248.2-201ENST00000623779 326 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 MIR3974-201ENST00000637126 96 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC093535.2-201ENST00000624769 2326 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC091046.3-201ENST00000631455 1574 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 AC099654.2-201ENST00000433031 1980 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 ZFRP1-201ENST00000457579 2970 ntBASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RUNDC3AQ59EK9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RUNDC3AQ59EK9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 RPL23P2-201ENST00000320371 421 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 MIR223-201ENST00000385204 110 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 RPL23AP29-201ENST00000397284 453 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 MIR1284-201ENST00000408337 120 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 RNA5SP146-201ENST00000410743 123 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 TIMM9P2-201ENST00000419324 266 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 MTND4P20-201ENST00000424125 869 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 AC093414.1-201ENST00000434712 514 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 AL591503.2-201ENST00000442314 1005 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 RPL18AP17-201ENST00000455326 198 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 RN7SL172P-201ENST00000460535 303 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 APOOP2-201ENST00000461561 539 ntBASIC4.46□□□□□ -1.7
RUNDC3AQ59EK9 RN7SL177P-201ENST00000476596 299 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms