Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 DHX40P1-201ENST00000588725 1412 ntBASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 AL390838.2-201ENST00000602394 274 ntBASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 AC133552.5-201ENST00000604266 540 ntBASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 MIR6853-201ENST00000619642 74 ntBASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 AC073530.2-201ENST00000623987 261 ntBASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A4Q53GD3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC093775.1-201ENST00000624154 1868 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC006210.2-201ENST00000367074 1545 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC005539.1-201ENST00000443768 1479 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC010928.1-201ENST00000592477 1447 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 U3.22-201ENST00000391120 215 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AL121978.1-201ENST00000402778 359 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 SNORA77-201ENST00000408716 125 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 FCF1P2-201ENST00000415284 583 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 RPS3AP44-201ENST00000425466 790 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 OR2AH1P-201ENST00000425717 928 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 PRELID3BP10-201ENST00000431957 584 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AL050321.1-201ENST00000432363 400 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 MTCYBP3-201ENST00000445588 1137 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AL606662.1-201ENST00000445763 553 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC073587.1-201ENST00000447093 876 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 RPS27AP15-201ENST00000447672 466 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 PRPF38AP1-201ENST00000451976 933 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 RPL23AP56-201ENST00000460778 453 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC092754.2-201ENST00000463506 460 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC010307.1-201ENST00000467206 836 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC104689.1-201ENST00000473356 768 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 BZW1P2-201ENST00000473537 826 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 NIP7P2-201ENST00000485801 544 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC107401.1-201ENST00000503426 685 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC016559.2-201ENST00000510759 359 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 MTND5P13-201ENST00000513046 1079 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AP001189.2-201ENST00000527320 189 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC027369.5-201ENST00000533838 755 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 UBE2NP1-201ENST00000545592 458 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC002400.1-201ENST00000569310 726 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 OR4K7P-201ENST00000580232 945 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC090616.2-202ENST00000584248 222 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 PRPF19P1-201ENST00000584766 898 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC004987.4-201ENST00000603383 338 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC009220.3-201ENST00000604318 586 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AL163642.2-201ENST00000604722 1019 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC124312.4-201ENST00000605533 310 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AL354760.1-201ENST00000608357 643 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC022306.2-201ENST00000617563 647 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 MIR6839-201ENST00000620425 113 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC084035.1-201ENST00000634543 607 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 MIR6830-201ENST00000636015 70 ntBASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A4Q53GD3 AL022322.2-201ENST00000624072 20397 ntBASIC5.09□□□□□ -1.6
SLC44A4Q53GD3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A4Q53GD3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A4Q53GD3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A4Q53GD3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A4Q53GD3 AC139713.2-214ENST00000642059 1811 ntBASIC5.09□□□□□ -1.6
SLC44A4Q53GD3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SLC44A4Q53GD3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SLC44A4Q53GD3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 LINC01109-201ENST00000603837 3081 ntBASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.08□□□□□ -1.6
SLC44A4Q53GD3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms