Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC38Q502W7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC38Q502W7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC38Q502W7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC38Q502W7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC38Q502W7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 RNU6-984P-201ENST00000363236 109 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 RNA5SP123-201ENST00000363244 119 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 RN7SKP213-201ENST00000410746 298 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC38Q502W7 RPL31P2-201ENST00000413849 377 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 CHEK2P3-201ENST00000416118 248 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 AL139421.1-201ENST00000423010 169 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC092447.3-201ENST00000426027 686 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 RPS17P8-201ENST00000434525 335 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC38Q502W7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 MTND2P14-201ENST00000482139 351 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 ZNF705CP-201ENST00000530515 889 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 OR4A12P-201ENST00000530847 918 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC023538.1-201ENST00000534576 736 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 GCSHP4-201ENST00000538792 439 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC069240.1-201ENST00000548774 375 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 HMGN2P6-201ENST00000551091 273 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 MTND6P33-201ENST00000571794 183 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 VN1R78P-201ENST00000597393 564 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC087763.1-201ENST00000603391 286 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 AL121932.1-201ENST00000605542 214 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 AP003117.2-201ENST00000606010 545 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 AL121873.1-201ENST00000616013 524 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 MIR4496-201ENST00000635896 61 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC38Q502W7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC38Q502W7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC38Q502W7 AC053481.2-202ENST00000582394 1500 ntBASIC4.87□□□□□ -1.63
CCDC38Q502W7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC38Q502W7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC38Q502W7 AP000776.1-201ENST00000530032 1663 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC38Q502W7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC38Q502W7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 RNU6-216P-201ENST00000363282 104 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 SNORA58B-201ENST00000364259 136 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 RNU6-621P-201ENST00000364752 109 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC38Q502W7 AL023807.1-201ENST00000407932 359 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 RNU2-28P-201ENST00000410457 189 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 OR2AM1P-201ENST00000422137 422 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 RPL7P57-201ENST00000423238 740 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 MTCO2P20-201ENST00000437339 673 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC010733.1-201ENST00000451515 401 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC234781.3-201ENST00000452540 973 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 TRBV26-201ENST00000456572 344 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 RPS26P28-201ENST00000470806 348 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 GAPDHP36-201ENST00000480688 918 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 RN7SKP234-201ENST00000517173 224 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 AL389895.1-201ENST00000554127 252 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 HIGD1AP17-201ENST00000554576 276 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC079171.1-201ENST00000568788 914 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC007566.2-201ENST00000603642 413 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 AC020910.3-201ENST00000603701 874 ntBASIC4.86□□□□□ -1.63
CCDC38Q502W7 Z99289.3-201ENST00000605586 594 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms