Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 NPM1P45-201ENST00000583151 559 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 MIR4506-201ENST00000584693 77 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 BNIP3P38-201ENST00000601117 544 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AL133393.1-201ENST00000603277 287 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC110801.1-201ENST00000623590 212 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC019080.5-201ENST00000624891 757 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AP000553.6-201ENST00000641242 118 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 MTND5P7-201ENST00000413558 1798 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 RNU6-1331P-201ENST00000363658 106 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 RPL23AP47-201ENST00000408017 460 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 U3.39-201ENST00000408569 239 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 SNORA3.3-201ENST00000408712 125 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AL356095.1-201ENST00000417217 199 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 SDCBPP3-201ENST00000419629 891 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 TRIM60P18-201ENST00000441518 828 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 HSPE1P28-201ENST00000443139 211 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AC010655.1-201ENST00000449336 292 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AC015726.1-201ENST00000602353 681 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 ARF4P1-201ENST00000605447 541 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 MIR492-201ENST00000638676 116 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 RLIMP1-201ENST00000339626 1680 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC58Q4VC31 AC068647.1-201ENST00000489539 2265 ntBASIC3.22□□□□□ -1.89
CCDC58Q4VC31 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CCDC58Q4VC31 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 GLRXP1-201ENST00000423261 334 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC093084.1-201ENST00000424233 687 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 BX890604.2-201ENST00000427883 474 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 RPS26P21-201ENST00000475397 348 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC007688.1-201ENST00000475592 759 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 RPS4XP15-201ENST00000489210 795 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 OR5H4P-201ENST00000510851 923 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 RN7SKP21-201ENST00000516503 220 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AP000619.3-201ENST00000535634 1127 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC034268.2-201ENST00000571784 482 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AP000919.1-202ENST00000581139 1264 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC034236.3-201ENST00000605999 461 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC092354.2-201ENST00000607786 514 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC121761.2-201ENST00000617300 689 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 AC112484.5-201ENST00000624189 228 ntBASIC3.21□□□□□ -1.9
CCDC58Q4VC31 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC58Q4VC31 XPOTP1-201ENST00000443317 2398 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 CCT8P1-201ENST00000413611 1657 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 RN7SKP280-201ENST00000364196 304 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 RNA5SP107-201ENST00000411358 122 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 AC068533.1-201ENST00000418542 415 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC58Q4VC31 AL590103.1-201ENST00000434488 307 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 HIGD1AP11-201ENST00000438361 280 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 VN1R48P-201ENST00000448149 1036 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 AC093392.2-201ENST00000450682 337 ntBASIC3.2□□□□□ -1.9
CCDC58Q4VC31 RPS27AP1-201ENST00000475545 471 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms