Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX4Q33E94 AC093014.1-201ENST00000548926 724 ntBASIC3.53□□□□□ -1.84
RFX4Q33E94 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX4Q33E94 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX4Q33E94 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX4Q33E94 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.53□□□□□ -1.84
RFX4Q33E94 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.53□□□□□ -1.84
RFX4Q33E94 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX4Q33E94 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.53□□□□□ -1.84
RFX4Q33E94 AC090525.3-201ENST00000605601 189 ntBASIC3.53□□□□□ -1.84
RFX4Q33E94 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX4Q33E94 AP006248.3-201ENST00000623580 594 ntBASIC3.53□□□□□ -1.84
RFX4Q33E94 AC020978.9-201ENST00000624380 1141 ntBASIC3.53□□□□□ -1.84
RFX4Q33E94 AC116563.2-201ENST00000624751 535 ntBASIC3.53□□□□□ -1.84
RFX4Q33E94 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX4Q33E94 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX4Q33E94 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFX4Q33E94 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.53□□□□□ -1.84
RFX4Q33E94 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
RFX4Q33E94 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFX4Q33E94 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.52□□□□□ -1.85
RFX4Q33E94 DCAF13P1-201ENST00000495256 1330 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.52□□□□□ -1.85
RFX4Q33E94 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX4Q33E94 RNU6-452P-201ENST00000384406 107 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFX4Q33E94 OR6C69P-201ENST00000394268 893 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 MTND4P11-201ENST00000417020 1058 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX4Q33E94 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX4Q33E94 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX4Q33E94 MTND4P15-201ENST00000437913 1033 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX4Q33E94 AL513321.1-201ENST00000441175 761 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 AC006480.1-201ENST00000449887 378 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.52□□□□□ -1.85
RFX4Q33E94 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.52□□□□□ -1.85
RFX4Q33E94 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX4Q33E94 RPL23AP12-201ENST00000467573 473 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 CYCSP20-201ENST00000473154 315 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.52□□□□□ -1.85
RFX4Q33E94 ACTG1P13-201ENST00000486987 1043 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 OR5H4P-201ENST00000510851 923 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 RNA5SP179-201ENST00000517284 121 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 C1GALT1P3-201ENST00000522049 819 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.52□□□□□ -1.85
RFX4Q33E94 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX4Q33E94 MIR4700-201ENST00000578311 74 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 MIR548Y-201ENST00000582739 110 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX4Q33E94 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.52□□□□□ -1.85
RFX4Q33E94 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.52□□□□□ -1.85
RFX4Q33E94 AC011492.1-201ENST00000600023 315 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 AC091167.4-201ENST00000605079 184 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 AC023043.4-201ENST00000612081 449 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 AL445567.2-201ENST00000618935 498 ntBASIC3.52□□□□□ -1.85
RFX4Q33E94 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
RFX4Q33E94 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.52□□□□□ -1.85
RFX4Q33E94 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFX4Q33E94 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFX4Q33E94 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.51□□□□□ -1.85
RFX4Q33E94 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.51□□□□□ -1.85
RFX4Q33E94 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RFX4Q33E94 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RFX4Q33E94 RNF6P1-201ENST00000444889 1784 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 RNU6-252P-201ENST00000363232 107 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX4Q33E94 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.51□□□□□ -1.85
RFX4Q33E94 FAR2P4-202ENST00000425399 584 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 AL356276.2-201ENST00000435919 558 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX4Q33E94 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX4Q33E94 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
RFX4Q33E94 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX4Q33E94 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.51□□□□□ -1.85
RFX4Q33E94 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 SNX5P1-201ENST00000505757 1041 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX4Q33E94 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.51□□□□□ -1.85
RFX4Q33E94 IGKV2D-10-201ENST00000520194 281 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX4Q33E94 YPEL5P3-201ENST00000547227 352 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 OR4U1P-201ENST00000554958 912 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 LINC00557-201ENST00000563184 1279 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX4Q33E94 SUMO2P14-201ENST00000604488 293 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 AC015849.2-201ENST00000605738 409 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 AC103710.3-201ENST00000608157 948 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX4Q33E94 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.51□□□□□ -1.85
RFX4Q33E94 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX4Q33E94 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RFX4Q33E94 AC058791.1-201ENST00000608412 3198 ntBASIC3.51□□□□□ -1.85
RFX4Q33E94 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms