Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 Z99496.1-201ENST00000469424 1477 ntBASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM71Q2Q1W2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AL512646.1-201ENST00000269395 1077 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC017079.1-201ENST00000333650 415 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 RNA5SP388-201ENST00000362584 119 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 RNU1-130P-201ENST00000363930 160 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 Y_RNA.465-201ENST00000384293 102 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 SNORA37-201ENST00000384504 129 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AP000580.1-201ENST00000404439 358 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 MIR1302-8-201ENST00000408342 128 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 RNU6-603P-201ENST00000411403 107 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 USP9YP14-201ENST00000430663 563 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 SEPT7P5-201ENST00000434048 306 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 MTCO2P3-201ENST00000442543 421 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 NUTF2P3-201ENST00000448540 384 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 RN7SL98P-201ENST00000462271 300 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC011352.3-201ENST00000505162 593 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC008494.2-201ENST00000514544 370 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 MIR1254-2-201ENST00000579553 63 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AP005136.1-201ENST00000579765 429 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC022662.1-201ENST00000580252 331 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AL158042.1-201ENST00000605338 460 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AP004247.3-201ENST00000608682 624 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC105227.2-201ENST00000615075 605 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC234782.5-201ENST00000617723 324 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AL157770.1-201ENST00000623049 439 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AC021755.1-201ENST00000559747 1447 ntBASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM71Q2Q1W2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 NEAT1-202ENST00000501122 22743 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AL121657.1-201ENST00000327215 531 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 SNORA70C-201ENST00000384538 135 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 RN7SKP27-201ENST00000410684 333 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 RN7SKP263-201ENST00000411194 309 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AL450992.3-201ENST00000413192 568 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC099336.2-201ENST00000422457 254 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 MTND1P20-201ENST00000430341 950 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 KCTD10P1-201ENST00000434203 625 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 FGF7P5-201ENST00000441829 291 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 RPL7P59-201ENST00000447700 943 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 ART2BP-201ENST00000453501 499 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC099560.2-201ENST00000457554 255 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC011979.1-201ENST00000472300 483 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 RN7SL809P-201ENST00000482040 297 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 PSMB7P1-201ENST00000556349 514 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC127024.5-201ENST00000580085 462 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 ARF4P1-201ENST00000605447 541 ntBASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
TRIM71Q2Q1W2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
TRIM71Q2Q1W2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM71Q2Q1W2 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.01□□□□□ -1.61
TRIM71Q2Q1W2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TRIM71Q2Q1W2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM71Q2Q1W2 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms