Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX1Q15475 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.95□□□□□ -1.78
SIX1Q15475 AC092685.1-201ENST00000447960 1243 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX1Q15475 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX1Q15475 MTCO3P16-201ENST00000454456 754 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC099560.2-201ENST00000457554 255 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 ELOCP12-201ENST00000458706 328 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC018635.1-201ENST00000468292 1030 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AL161747.1-201ENST00000480068 358 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 RN7SKP209-201ENST00000516888 304 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC008489.1-201ENST00000524271 483 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AP003717.3-201ENST00000544832 1180 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX1Q15475 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SIX1Q15475 YWHAZP1-201ENST00000556286 722 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX1Q15475 CD24P2-201ENST00000565486 219 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SIX1Q15475 AC090312.1-201ENST00000580637 348 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC011492.1-201ENST00000600023 315 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX1Q15475 AC023510.2-201ENST00000622162 746 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC126544.2-201ENST00000625174 749 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 AC068724.3-201ENST00000625906 87 ntBASIC3.95□□□□□ -1.78
SIX1Q15475 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX1Q15475 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX1Q15475 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX1Q15475 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SIX1Q15475 AC006504.1-201ENST00000562493 3666 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 RLIMP1-201ENST00000339626 1680 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SIX1Q15475 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX1Q15475 METTL21EP-201ENST00000298105 713 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX1Q15475 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 RNU6-283P-201ENST00000364788 107 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC234772.1-201ENST00000377927 937 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AL391417.1-201ENST00000404100 426 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AL450992.3-201ENST00000413192 568 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC105402.1-201ENST00000413336 545 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX1Q15475 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX1Q15475 AC073136.2-201ENST00000417282 849 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX1Q15475 RPL17P36-201ENST00000420302 549 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.94□□□□□ -1.78
SIX1Q15475 ETF1P3-201ENST00000430422 1160 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 NDUFB1P1-201ENST00000435191 180 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX1Q15475 RPS4XP15-201ENST00000489210 795 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC108941.1-201ENST00000502853 530 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 TPT1P8-201ENST00000510120 555 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX1Q15475 MTCO1P35-201ENST00000515270 228 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 RNU6-415P-201ENST00000516252 97 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 MIR2116-201ENST00000517221 80 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX1Q15475 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX1Q15475 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX1Q15475 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX1Q15475 AC023825.1-201ENST00000566704 1030 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX1Q15475 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.94□□□□□ -1.78
SIX1Q15475 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX1Q15475 SNORA62.6-201ENST00000606322 83 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC112503.1-201ENST00000608436 391 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC124016.2-201ENST00000610058 665 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX1Q15475 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX1Q15475 AC068831.8-201ENST00000620171 435 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC010608.3-201ENST00000625048 527 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SIX1Q15475 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX1Q15475 AC132825.7-201ENST00000638744 335 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 AC006927.2-201ENST00000639256 389 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SIX1Q15475 MTCO1P18-201ENST00000455518 1419 ntBASIC3.94□□□□□ -1.78
SIX1Q15475 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX1Q15475 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX1Q15475 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SIX1Q15475 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 AC093535.2-201ENST00000624769 2326 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AL450326.2-201ENST00000421913 1962 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX1Q15475 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SIX1Q15475 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX1Q15475 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SIX1Q15475 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX1Q15475 HMGB3P31-201ENST00000413333 595 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 RPL30P2-201ENST00000414021 291 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 UBE2V1P9-201ENST00000414760 368 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AC241520.1-201ENST00000422654 1099 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 DEFB130D-201ENST00000426866 237 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX1Q15475 RPS27AP12-201ENST00000429552 465 ntBASIC3.93□□□□□ -1.78
SIX1Q15475 AC011242.1-201ENST00000433596 1158 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms