Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
GABPAQ06546 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
GABPAQ06546 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GABPAQ06546 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GABPAQ06546 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.38□□□□□ -1.71
GABPAQ06546 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
GABPAQ06546 OR52B1P-201ENST00000316506 909 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
GABPAQ06546 RNU6-304P-201ENST00000364855 107 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 RHOT1P2-201ENST00000366423 333 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 RNA5SP424-201ENST00000390988 115 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 RPS24P12-201ENST00000402084 394 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 HMGB1P13-201ENST00000406019 642 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 PTGES3P2-201ENST00000407942 482 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 AC009302.1-201ENST00000417147 390 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.38□□□□□ -1.71
GABPAQ06546 OR5AW1P-201ENST00000426334 1006 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 HSPD1P21-201ENST00000436541 245 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 AL357520.1-201ENST00000441557 453 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.38□□□□□ -1.71
GABPAQ06546 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.38□□□□□ -1.71
GABPAQ06546 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.38□□□□□ -1.71
GABPAQ06546 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.38□□□□□ -1.71
GABPAQ06546 HMGN1P11-201ENST00000508668 303 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.38□□□□□ -1.71
GABPAQ06546 RN7SKP18-201ENST00000516005 275 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 SNORA31.13-201ENST00000516624 135 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 CIR1P1-201ENST00000524055 1133 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
GABPAQ06546 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.38□□□□□ -1.71
GABPAQ06546 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.38□□□□□ -1.71
GABPAQ06546 AL109741.3-201ENST00000561748 592 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.38□□□□□ -1.71
GABPAQ06546 AP001033.2-201ENST00000609701 1003 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 AC244100.1-202ENST00000621554 382 ntBASIC4.38□□□□□ -1.71
GABPAQ06546 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GABPAQ06546 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
GABPAQ06546 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.38□□□□□ -1.71
GABPAQ06546 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
GABPAQ06546 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GABPAQ06546 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.38□□□□□ -1.71
GABPAQ06546 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
GABPAQ06546 LINC01109-201ENST00000603837 3081 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.37□□□□□ -1.71
GABPAQ06546 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.37□□□□□ -1.71
GABPAQ06546 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.37□□□□□ -1.71
GABPAQ06546 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
GABPAQ06546 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
GABPAQ06546 MIR183-201ENST00000384958 110 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 MIR93-201ENST00000385024 80 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.37□□□□□ -1.71
GABPAQ06546 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.37□□□□□ -1.71
GABPAQ06546 CYCSP4-201ENST00000429682 331 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 AL645931.1-201ENST00000439737 410 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 ELOCP10-201ENST00000440624 327 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 RPS3AP46-201ENST00000448352 682 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
GABPAQ06546 APOOP2-201ENST00000461561 539 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 AC113430.1-201ENST00000506872 718 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 AC027338.1-201ENST00000514840 825 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 MYL12AP1-201ENST00000518490 515 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 RANP9-201ENST00000519957 271 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.37□□□□□ -1.71
GABPAQ06546 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.37□□□□□ -1.71
GABPAQ06546 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.37□□□□□ -1.71
GABPAQ06546 ELOCP34-201ENST00000604436 327 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 AC007423.1-201ENST00000605009 627 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.37□□□□□ -1.71
GABPAQ06546 AC016957.2-201ENST00000616998 848 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.37□□□□□ -1.71
GABPAQ06546 AC093311.1-201ENST00000506586 2021 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 AL049781.1-201ENST00000623195 3585 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 MFSD8-236ENST00000641509 4050 ntBASIC4.37□□□□□ -1.71
GABPAQ06546 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
GABPAQ06546 AC092079.1-201ENST00000558620 1985 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.36□□□□□ -1.71
GABPAQ06546 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GABPAQ06546 LINC00561-201ENST00000565815 2738 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
GABPAQ06546 RNU6-252P-201ENST00000363232 107 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 SNORA62.2-201ENST00000364672 152 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GABPAQ06546 AC093719.1-202ENST00000392735 373 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 HLFP1-201ENST00000402375 499 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.36□□□□□ -1.71
GABPAQ06546 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.36□□□□□ -1.71
GABPAQ06546 AC245054.1-201ENST00000420944 258 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.36□□□□□ -1.71
GABPAQ06546 ATP5HP2-201ENST00000433885 485 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms