Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU6-513P-201ENST00000516104 104 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.37□□□□□ -2.03
PRKDCP78527 GMCL1P2-201ENST00000605230 823 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 CYCSP41-201ENST00000616920 296 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PRKDCP78527 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.37□□□□□ -2.03
PRKDCP78527 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
PRKDCP78527 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
PRKDCP78527 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.36□□□□□ -2.03
PRKDCP78527 GNG5P5-201ENST00000420444 220 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PRKDCP78527 NPM1P17-201ENST00000479221 602 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.36□□□□□ -2.03
PRKDCP78527 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.36□□□□□ -2.03
PRKDCP78527 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC2.36□□□□□ -2.03
PRKDCP78527 A2MP1-204ENST00000566278 4130 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PRKDCP78527 MAPK10-362ENST00000641864 4484 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 RNA5SP52-201ENST00000362448 134 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.36□□□□□ -2.03
PRKDCP78527 AL512643.1-201ENST00000635735 524 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 MIR1289-2-201ENST00000408360 111 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 SEPT7P8-201ENST00000413308 775 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 SEPT14P1-201ENST00000458703 648 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 AC023598.1-201ENST00000472521 361 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.36□□□□□ -2.03
PRKDCP78527 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.36□□□□□ -2.03
PRKDCP78527 AC107016.2-201ENST00000547968 190 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 UBL5P2-201ENST00000583788 219 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 AC138965.3-201ENST00000623875 498 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.36□□□□□ -2.03
PRKDCP78527 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PRKDCP78527 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
PRKDCP78527 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 AC131280.1-202ENST00000624067 4211 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC2.36□□□□□ -2.03
PRKDCP78527 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.36□□□□□ -2.03
PRKDCP78527 AK5-208ENST00000478255 556 ntTSL 2 BASIC2.36□□□□□ -2.03
PRKDCP78527 ARL4AP1-201ENST00000503220 705 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 AP006245.1-201ENST00000522549 120 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 AC087888.1-201ENST00000550884 1254 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 DUXAP6-201ENST00000553858 601 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 AL162574.2-201ENST00000614618 657 ntBASIC2.36□□□□□ -2.03
PRKDCP78527 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRKDCP78527 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 AL049780.3-201ENST00000624612 1583 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PRKDCP78527 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
PRKDCP78527 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PRKDCP78527 Y_RNA.4-201ENST00000362333 112 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 AL353692.2-201ENST00000407054 335 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.35□□□□□ -2.03
PRKDCP78527 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.35□□□□□ -2.03
PRKDCP78527 RNA5SP103-201ENST00000459503 118 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.35□□□□□ -2.03
PRKDCP78527 AC009097.3-201ENST00000563557 1018 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 DEFB122-202ENST00000569013 197 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.35□□□□□ -2.03
PRKDCP78527 AC098826.3-201ENST00000603823 466 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.35□□□□□ -2.03
PRKDCP78527 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.35□□□□□ -2.03
PRKDCP78527 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PRKDCP78527 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.35□□□□□ -2.03
PRKDCP78527 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC2.35□□□□□ -2.03
PRKDCP78527 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.35□□□□□ -2.03
PRKDCP78527 PCBP2P3-201ENST00000509726 843 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.35□□□□□ -2.03
PRKDCP78527 KCTD9P6-201ENST00000522306 950 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.35□□□□□ -2.03
PRKDCP78527 AC093524.1-201ENST00000564266 1094 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 MIR7154-201ENST00000620673 73 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 AC064859.1-201ENST00000624741 174 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.35□□□□□ -2.03
PRKDCP78527 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.35□□□□□ -2.03
PRKDCP78527 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.35□□□□□ -2.03
PRKDCP78527 SNORD109B-201ENST00000458961 67 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 SNORD109A-201ENST00000459128 67 ntBASIC2.35□□□□□ -2.03
PRKDCP78527 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms