Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AL122126.1-201ENST00000546905 1318 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.8□□□□□ -1.8
CX3CL1P78423 MAPK10-303ENST00000641324 3959 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
CX3CL1P78423 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CX3CL1P78423 RN7SKP149-201ENST00000363008 344 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 U3.30-201ENST00000391308 210 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 ENSAP1-201ENST00000392855 326 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 SSXP10-201ENST00000402595 565 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 HDGFP1-201ENST00000405943 252 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 U3.35-201ENST00000408405 208 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 RPL23AP16-201ENST00000441715 421 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 CEACAMP9-201ENST00000442990 513 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 OR1H1P-201ENST00000448731 937 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC104978.1-201ENST00000449387 391 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 SLC31A1P1-201ENST00000451221 567 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC010733.1-201ENST00000451515 401 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 BX276092.4-201ENST00000452056 248 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 RPS5P7-201ENST00000456664 608 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC010301.1-201ENST00000473936 355 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 RPL32P9-201ENST00000487963 407 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC104057.1-201ENST00000515547 497 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC105185.1-201ENST00000518705 535 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AP001922.4-201ENST00000526967 290 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AP003461.1-201ENST00000528866 78 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 MRPS36P5-201ENST00000551909 298 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 PCNPP1-201ENST00000552501 511 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC009117.1-201ENST00000563948 554 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC093249.4-201ENST00000564755 259 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 HNRNPCP4-201ENST00000571636 900 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 VN1R82P-201ENST00000601481 356 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AL031281.1-201ENST00000604049 488 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC025811.1-201ENST00000604312 472 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC116651.1-201ENST00000609724 556 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AL139418.1-201ENST00000613613 177 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC090246.1-201ENST00000616499 426 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC131238.1-201ENST00000617135 328 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 AC091304.6-201ENST00000619761 202 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC005086.4-201ENST00000623065 213 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.8□□□□□ -1.8
CX3CL1P78423 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.8□□□□□ -1.8
CX3CL1P78423 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.8□□□□□ -1.8
CX3CL1P78423 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CX3CL1P78423 AL136164.3-201ENST00000624429 3978 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CX3CL1P78423 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CX3CL1P78423 A2MP1-204ENST00000566278 4130 ntBASIC3.8□□□□□ -1.8
CX3CL1P78423 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.8□□□□□ -1.8
CX3CL1P78423 AC005539.1-201ENST00000443768 1479 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 OR10J6P-201ENST00000289731 930 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 OR56B2P-201ENST00000317102 954 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.79□□□□□ -1.8
CX3CL1P78423 GLULP6-201ENST00000399502 913 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CX3CL1P78423 BTBD10P2-201ENST00000404779 676 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AL023807.1-201ENST00000407932 359 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 VDAC1P9-201ENST00000412766 841 ntBASIC3.79□□□□□ -1.8
CX3CL1P78423 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.79□□□□□ -1.8
CX3CL1P78423 AC073136.2-201ENST00000417282 849 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms