Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SNORA71.2-201ENST00000364941 134 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 RNU6-1300P-201ENST00000391046 108 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN20P56880 Z98745.1-201ENST00000402553 494 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 RPL31P52-201ENST00000407532 367 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 PRELID3BP11-201ENST00000414230 479 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AC004552.1-201ENST00000419089 348 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN20P56880 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN20P56880 AL353748.1-201ENST00000440753 474 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN20P56880 ARL2BPP10-201ENST00000446487 531 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN20P56880 PPIAP21-201ENST00000464473 501 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 RPS26P3-201ENST00000470205 348 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN20P56880 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN20P56880 AC012158.1-204ENST00000483430 465 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AC090543.2-201ENST00000483963 348 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AC004057.1-201ENST00000485827 348 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AP000563.1-201ENST00000490865 758 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.16□□□□□ -1.74
CLDN20P56880 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLDN20P56880 AC007016.1-201ENST00000512110 244 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 RNU6-488P-201ENST00000515918 99 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 RNU6-885P-201ENST00000516607 104 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 RN7SKP92-201ENST00000517266 244 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 SMARCE1P4-201ENST00000523647 241 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AP001781.1-201ENST00000530977 207 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN20P56880 PDCL2P2-201ENST00000533651 189 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AP000619.3-201ENST00000535634 1127 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AC005832.3-201ENST00000537929 631 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN20P56880 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CLDN20P56880 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.16□□□□□ -1.74
CLDN20P56880 AC008687.2-201ENST00000597865 520 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 RPL7P50-201ENST00000600588 727 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN20P56880 AC008745.1-201ENST00000604064 271 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AL133338.2-201ENST00000604292 736 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 AC243756.2-201ENST00000618406 463 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN20P56880 AL359757.1-201ENST00000623176 255 ntBASIC4.16□□□□□ -1.74
CLDN20P56880 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLDN20P56880 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLDN20P56880 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN20P56880 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CLDN20P56880 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN20P56880 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN20P56880 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN20P56880 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.16□□□□□ -1.74
CLDN20P56880 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLDN20P56880 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN20P56880 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.16□□□□□ -1.74
CLDN20P56880 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.16□□□□□ -1.74
CLDN20P56880 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.15□□□□□ -1.74
CLDN20P56880 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLDN20P56880 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLDN20P56880 AL391684.1-202ENST00000641293 1636 ntBASIC4.15□□□□□ -1.74
CLDN20P56880 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 AC021146.4-201ENST00000309229 279 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 RPS4XP9-201ENST00000405151 780 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 HNRNPDP2-201ENST00000406475 478 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AL133264.1-201ENST00000407157 562 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 RNA5SP80-201ENST00000410475 111 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDN20P56880 USP9YP11-201ENST00000427537 717 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN20P56880 AL008629.1-201ENST00000438615 184 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 RPL21P134-201ENST00000453468 483 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 FGF7P3-201ENST00000454645 303 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 AL133477.1-201ENST00000457472 514 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDN20P56880 SCARNA10-201ENST00000459255 330 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN20P56880 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN20P56880 NDUFB4P12-201ENST00000513465 390 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN20P56880 RNU6-1225P-201ENST00000516336 65 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLDN20P56880 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.15□□□□□ -1.75
CLDN20P56880 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.15□□□□□ -1.75
CLDN20P56880 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 GTF2IP8-201ENST00000560687 584 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AGGF1P6-201ENST00000569213 976 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.15□□□□□ -1.75
CLDN20P56880 AC068790.4-201ENST00000602474 263 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AL139344.1-201ENST00000605228 195 ntBASIC4.15□□□□□ -1.75
CLDN20P56880 AC080013.3-201ENST00000606839 578 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms