Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 AC017007.4-201ENST00000503353 1352 ntBASIC2.89□□□□□ -1.95
CMC4P56277 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CMC4P56277 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.89□□□□□ -1.95
CMC4P56277 RNU6-543P-201ENST00000362576 108 ntBASIC2.89□□□□□ -1.95
CMC4P56277 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC2.89□□□□□ -1.95
CMC4P56277 AL356967.1-201ENST00000406305 431 ntBASIC2.89□□□□□ -1.95
CMC4P56277 RN7SKP56-201ENST00000410513 331 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.89□□□□□ -1.95
CMC4P56277 RPS12P23-201ENST00000419579 400 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AC008065.1-201ENST00000428525 348 ntBASIC2.89□□□□□ -1.95
CMC4P56277 NANOGP6-201ENST00000429190 847 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.89□□□□□ -1.95
CMC4P56277 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.89□□□□□ -1.95
CMC4P56277 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.89□□□□□ -1.95
CMC4P56277 AC068135.1-201ENST00000446164 246 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AL500522.2-201ENST00000448562 343 ntBASIC2.89□□□□□ -1.95
CMC4P56277 NUTF2P7-201ENST00000453086 375 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.89□□□□□ -1.95
CMC4P56277 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.89□□□□□ -1.95
CMC4P56277 MTCO3P20-201ENST00000454926 688 ntBASIC2.89□□□□□ -1.95
CMC4P56277 RPL21P103-201ENST00000479921 488 ntBASIC2.89□□□□□ -1.95
CMC4P56277 RPL31P61-201ENST00000496160 376 ntBASIC2.89□□□□□ -1.95
CMC4P56277 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.89□□□□□ -1.95
CMC4P56277 RN7SKP283-201ENST00000517197 270 ntBASIC2.89□□□□□ -1.95
CMC4P56277 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC2.89□□□□□ -1.95
CMC4P56277 NDUFA5P2-201ENST00000519723 344 ntBASIC2.89□□□□□ -1.95
CMC4P56277 SUMO2P20-201ENST00000520803 283 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.89□□□□□ -1.95
CMC4P56277 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.89□□□□□ -1.95
CMC4P56277 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.89□□□□□ -1.95
CMC4P56277 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.89□□□□□ -1.95
CMC4P56277 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
CMC4P56277 YPEL5P3-201ENST00000547227 352 ntBASIC2.89□□□□□ -1.95
CMC4P56277 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.89□□□□□ -1.95
CMC4P56277 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.89□□□□□ -1.95
CMC4P56277 MIR5685-201ENST00000579080 79 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AC090312.2-201ENST00000582687 378 ntBASIC2.89□□□□□ -1.95
CMC4P56277 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.89□□□□□ -1.95
CMC4P56277 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.89□□□□□ -1.95
CMC4P56277 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC2.89□□□□□ -1.95
CMC4P56277 AC079880.2-201ENST00000603790 1213 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AL163642.2-201ENST00000604722 1019 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AL450270.1-201ENST00000606160 391 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AL118556.2-201ENST00000614375 824 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AL354696.1-201ENST00000614652 497 ntBASIC2.89□□□□□ -1.95
CMC4P56277 FRG1HP-204ENST00000617940 757 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AC095038.2-201ENST00000621464 1070 ntBASIC2.89□□□□□ -1.95
CMC4P56277 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.89□□□□□ -1.95
CMC4P56277 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.89□□□□□ -1.95
CMC4P56277 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.89□□□□□ -1.95
CMC4P56277 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CMC4P56277 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CMC4P56277 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CMC4P56277 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CMC4P56277 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CMC4P56277 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CMC4P56277 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CMC4P56277 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CMC4P56277 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CMC4P56277 AL512646.1-201ENST00000269395 1077 ntBASIC2.88□□□□□ -1.95
CMC4P56277 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CMC4P56277 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CMC4P56277 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.88□□□□□ -1.95
CMC4P56277 RN7SKP44-201ENST00000363602 316 ntBASIC2.88□□□□□ -1.95
CMC4P56277 MIR1303-201ENST00000408625 86 ntBASIC2.88□□□□□ -1.95
CMC4P56277 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CMC4P56277 RPL31P45-201ENST00000419532 356 ntBASIC2.88□□□□□ -1.95
CMC4P56277 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.88□□□□□ -1.95
CMC4P56277 HIGD1AP12-201ENST00000427832 281 ntBASIC2.88□□□□□ -1.95
CMC4P56277 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.88□□□□□ -1.95
CMC4P56277 ELOCP3-201ENST00000439303 348 ntBASIC2.88□□□□□ -1.95
CMC4P56277 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.88□□□□□ -1.95
CMC4P56277 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.88□□□□□ -1.95
CMC4P56277 AC010469.1-201ENST00000463864 576 ntBASIC2.88□□□□□ -1.95
CMC4P56277 RPS20P21-201ENST00000466859 343 ntBASIC2.88□□□□□ -1.95
CMC4P56277 CREM-230ENST00000474931 626 ntTSL 2 BASIC2.88□□□□□ -1.95
CMC4P56277 AC126121.1-201ENST00000482313 553 ntBASIC2.88□□□□□ -1.95
CMC4P56277 VN1R105P-201ENST00000486595 910 ntBASIC2.88□□□□□ -1.95
CMC4P56277 AC069499.1-201ENST00000489433 509 ntBASIC2.88□□□□□ -1.95
CMC4P56277 RN7SL323P-201ENST00000494712 295 ntBASIC2.88□□□□□ -1.95
CMC4P56277 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.88□□□□□ -1.95
CMC4P56277 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.88□□□□□ -1.95
CMC4P56277 HMGN1P11-201ENST00000508668 303 ntBASIC2.88□□□□□ -1.95
CMC4P56277 MTND4LP31-201ENST00000514859 294 ntBASIC2.88□□□□□ -1.95
CMC4P56277 SNORA76.2-201ENST00000517095 137 ntBASIC2.88□□□□□ -1.95
CMC4P56277 AC087369.1-201ENST00000520775 996 ntBASIC2.88□□□□□ -1.95
CMC4P56277 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.88□□□□□ -1.95
CMC4P56277 AC010306.1-201ENST00000523223 1117 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms